Siniperca chuatsi (mandarin fish): 122861455 Help Entry 122861455         CDS       T08948                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu04115   p53 signaling pathway schu04145   Phagosome schu04148   Efferocytosis schu04350   TGF-beta signaling pathway schu04510   Focal adhesion schu04512   ECM-receptor interaction schu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:schu00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     122861455   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122861455  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     122861455    04148 Efferocytosis     122861455   09143 Cell growth and death    04115 p53 signaling pathway     122861455   09144 Cellular community - eukaryotes    04510 Focal adhesion     122861455   09142 Cell motility    04820 Cytoskeleton in muscle cells     122861455  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:schu04131]     122861455   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:schu00536]     122861455 Membrane trafficking [BR:schu04131]  Endocytosis   Phagocytosis    Opsonins     122861455 Glycosaminoglycan binding proteins [BR:schu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122861455 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS TSP1_CFP_C EGF_CA EGF Laminin_G_3 cEGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  122861455 NCBI-ProteinID:  XP_044021827 LinkDB All DBs Position LG15:12718360..12727336 Genome browser AA seq 1170 aa AA seqDB search MMLCGIFLLFMLWSCEGAILAESREDNSVYDLFDLARVNKRHHGVSLVKGADPYSPAYKV LNADLIPPVPDSSLRDLLDSIQAERGFLLLVNLKQFKKTRGSLLTIEKNDGSGPVFEIIS NGKANTLDVVYSTMNQQQVVSIEDVDLATGHWKNITLFVQDDRVQLYVGCEEISASEMDF PIHKVLSQEVADIARLRIGKGAVRDRFMGVLQNVRFVFGTTLDAIMRNKGCQSGATLTDV MTLDNPVNGSSPAIRTDYTGHKTKDLQSVCGFSCEDIASMFKELKGLGVVVKKLSNELHK VYEETIQIKMNFPKGKCFHNGIAYKDKDEWTVDGCTECTCQNSATMCRKISCPLIPCTNA TVLDGECCPRCGTPSDYAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINNNCEGTSVQT RDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEGRQ TEICQKSPCPINGGWGPWSPWDTCTVTCGGGIQTRKRLCSDPVPKYGGKDCVGDATMSQV CNKQDCPIDGCLSNPCFAGTKCASFPDGSFKCGKCPIGYTGNGITCKDVDECKEVPDACH SHNGVHRCENTEPGYNCLPCPTRFSGPQPFGRGVEQATAKKQVCKPRNPCQDGSHDCHKN ANCIYLGVFSESMFRCECKPGYAGNGRICGEDSDLDGWPNTDLLCVENATYHCKKDNCPN LPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPRVYNPAQYDADRDDIGDRCDNCVFE ANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLEH NPDQIDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDN DGIPDDKDNCRLAFNPDQVDSDGDGRGDVCKDDFDQDNVLDIYDVCPENFAISETDFRRF QMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFSAVDFSGTFFINTDRDD DYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRNAL WHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNIYD KTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatttttttgctgtttatgctttggagttgtgaaggcgcaatattg gcagagagtcgggaagataacagtgtgtatgacttatttgatctcgcccgggtaaacaag agacaccacggagtgagtttggtcaaaggcgcagatccctacagccctgcatacaaggtc ctgaatgcagacctgatccccccagtccccgacagctccctcagggacctcctcgactcc atccaggctgaaaggggcttcctcctcctggtcaacctgaagcagttcaagaaaaccagg ggcagccttttgaccattgagaagaatgacggctctggacccgttttcgagatcatttcc aatgggaaggcaaacactctggatgtggtctactccaccatgaaccagcagcaggtcgtg agcatcgaggatgtagatttggccactggacactggaagaacatcacgctgttcgttcag gatgaccgagtgcagctttacgtcggctgtgaggagatcagtgcgtcagagatggatttt ccaatccataaagtgctgtcccaggaggtggcagacattgccagactcaggattggaaag ggagctgtgagggacagattcatgggagtgcttcaaaatgtgcgctttgtttttgggacc actcttgatgccataatgagaaataagggatgccagagtggagctaccttaaccgatgtc atgaccttggacaacccagtcaatggctccagccctgccattaggactgattacaccggc cacaaaaccaaagatctgcagtctgtctgcggcttctcttgtgaggacatcgccagcatg tttaaggagctcaagggactcggtgtggttgttaaaaagttgtcgaatgagctccacaaa gtgtatgaggaaaccatacaaattaaaatgaacttccccaaaggaaagtgcttccacaac ggtattgcgtacaaggacaaagacgagtggaccgtggatggctgcaccgagtgcacctgc cagaactctgctactatgtgtcgcaaaatctcctgccctctgatcccatgtacaaatgcc actgtgctcgatggagagtgctgccctcgctgtggaacaccgagcgactatgcagaggac ggttggtccccctggtccgaatggacccattgttcggtgacatgcggtcggggcatccag cagcgcggacgctcctgtgaccgcatcaacaacaactgtgagggcacctctgtccagacc cgtgactgctatccccaggaatgtgacaaacgcttcaaacaggatggtggttggagccac tggtctccctggtcttcgtgctctgtgacctgtggtgagggggtcatcacgcggatacgc ctctgcaactcccccacaccccagatgggtggaagggactgccagggagaaggacgtcaa accgaaatctgccaaaagtcaccctgtcctatcaatggaggttggggaccttggtcacca tgggacacctgcactgttacctgtggtggaggaatccagacccgcaaacgtctctgctct gaccctgtccccaaatatggaggaaaggattgcgttggtgatgctactatgtctcaagtg tgcaataaacaggactgccctattgatggttgtctctctaacccatgctttgccggcaca aagtgcgccagcttccctgatggctctttcaagtgtggcaagtgtccaattggctacaca gggaatggcatcacctgcaaagacgttgatgagtgtaaagaggtccctgatgcttgccat tcacataacggtgtccatcgctgtgagaacactgagcctggttacaactgtcttccctgc cccacacgtttctctggtcctcagccctttggaagaggagtggaacaggcaactgctaaa aaacaggtttgcaaaccccgtaacccttgccaggatggtagccacgactgtcataaaaat gcaaactgcatctacttgggcgtcttctctgagtccatgttccgctgtgagtgcaagcca gggtatgccgggaatggccgtatttgcggagaggacagtgacctggacggatggcccaac actgacctgctgtgtgtggagaatgccacctaccactgcaagaaggataactgtcccaac cttcccaactctggccaggaggatcatgataaagatggcctgggtgatgaatgtgaccat gatgatgacaatgatgggatccccgatgatagggacaactgcccaagagtgtacaaccct gcccagtatgatgcagacagagatgacattggcgaccgctgtgataactgtgtgttcgag gctaacactgaccaaaccgacactgacaacaatggagagggtgatgcctgtgctgttgac attgatggtgatggcattctgaatgagaacgacaattgcccatatgtttacaatgtggac cagagagacactgacagggacggggtgggagaccattgtgacaactgccctctggagcac aaccctgatcagatcgactctgactcagatctcataggagacaagtgtgacaacaaccag gacattgatgaggacggtcaccagaacaacttggacaactgcccctacatacccaacgcc aaccaggcagaccacgacaaggatggcaagggtgatgcctgtgaccatgatgatgataac gacggaattcctgatgacaaagacaactgtaggctggcctttaaccctgatcaggtggat tctgacggtgatggccgtggtgatgtgtgcaaagacgattttgaccaagacaatgttctg gacatctatgatgtgtgcccagagaactttgccatcagtgaaacagacttccgcagattc caaatggttcctctggaccccaagggcacctcccagattgaccccaactgggtggtccgg catcagggcaaggagttggtgcagactgtcaactgcgatccaggcattgctgttggttac gatgagttcagcgcagtggacttcagtggaacattcttcatcaacacagacagagatgat gactacgctgggtttgtgtttggctaccagtccagctcacgcttctacacagtgatgtgg aaacagatcacacagacatactggtcccacacacccacaagagctcaaggctactctggc ctgtcaatcaaagtagtcaactccaccaccgggcctggtgagcatctgaggaacgccctg tggcacactggagacaccgcaggacaggtgcgcactctgtggcatgaccccaagaacatt ggctggaaggacttcactgcctacagatggcatctgacccacagacccaagactggactt attagagtggtcatgtatgaaggcaaaagaatcatggccgattctggaaacatctacgac aaaacgtatgctggtgggcgactaggcttgtacgttttctctcaggagatggtttacttc tctgacctcaaatacgaatgcagagatacataa

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