Siniperca chuatsi (mandarin fish): 122861773
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Entry
122861773 CDS
T08948
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122861773 (bcl11ba)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122861773 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
122861773
NCBI-ProteinID:
XP_044022574
LinkDB
All DBs
Position
LG15:400255..448065
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AA seq
844 aa
AA seq
DB search
MSRRKQGNPQHLSQREIPPELEHPDGGLLSDSLPPHPLGLPSHPLGLPPHPLDPSLAHAL
PPGLQADHDLLTCGQCQMTLPLGDILLFIEHKKKQCQTPLLANGCYDKMTDRGGGGGSPT
LQSLHHHAQRGELRKVVEPVEIGIQVTPEEEEEVGGGERGQRTPTKGICPKQENTPAGGR
DEPSSYICTTCKQPFPSAWFLLQHAQNTHGIRIYLESNPSSTALTPRITMPPPMGNDSIP
QSPLTNFLGDNNPFHLLRMTAPLLREPPPGFVENRLPNTPPFVSPPPRHHLDPHRLERLS
AEEMGLISQHPSAFERVMRLTPMAMESQSMDFSRRLRELAGNTNSTTPPLSPSRANPMHR
LLNPNPFQPGPKSPFLSTPPLLPMPPNSTTPPQTQNKIKSCEFCGKTFKFQSNLVVHRRS
HTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSLTGRSDDGLSTTSSPEPGTSDVTGE
GMKNRDGDFQGEGNEEDEEEEEEEELENESRPESNFSMESEFYRNRENGSKPPSEEKSSF
ALEKMVEGGGLNSIQQYNNLIVDNRKRMPFSKRCLDGQRETGDEDSVAGEMDHHQQEERT
TINGRNCGSGDSFSGLFPRKPTPITSPSLSNSSNKRIKIEKDLDIPPAPHIPSENVYSQW
LVGYAASRHFIKDPFLGFTDSRQSPFATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTA
SGGSTPHLGGGPGPGRPSSKDSRRCDTCEFCGKVFKNCSNLTVHRRSHTGERPYKCELCN
YACAQSSKLTRHMKTHGQLGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTNEVKIEQ
AERT
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccgcagcacctgtcccagagagaaatcccaccagag
cttgagcatccagatggcggcctgctctccgactccctacccccccacccgctcggcctg
ccctcccacccgctcggcctacctccccacccgctggaccctagtctggcccacgccctg
ccacccggcctccaagctgaccacgacctgttgacctgcggccagtgtcagatgaccctc
ccgctgggcgacatcctcctcttcattgagcacaagaagaagcagtgccaaacgccgctg
ctggccaatggctgctacgacaagatgaccgaccggggaggaggaggagggagtccgact
ctgcagagccttcatcaccacgcacagcggggggagctgaggaaggtggtggagccggtg
gagatcggcatccaggtgacaccagaggaggaggaggaggtgggaggaggtgagagggga
cagaggacgcccaccaaaggaatttgccccaagcaggagaacacaccggcaggtggcaga
gatgagccttccagctatatatgtaccacatgtaagcagcccttccccagcgcctggttc
ctgctgcagcatgcccagaacacccatggcattcgcatatacctagagtccaacccgtcc
agcacagccctcaccccacgcatcactatgcctccacccatgggtaacgactccatcccg
cagtcccccctcaccaactttctcggggacaacaaccccttccacctcctaaggatgaca
gcccccctgctccgggagcctcccccaggcttcgtggagaaccgcctccccaacacgcct
ccattcgtcagcccgcctccccgccaccacctggacccccatcggctggaacgccttagc
gcagaggaaatgggcctcatctcccagcaccccagtgcctttgagagggtgatgcggcta
acgcccatggccatggagtcccagtccatggacttctccaggcggttacgtgagttggca
gggaacaccaacagcaccacaccaccgttgtcacccagcagggccaaccctatgcaccga
ctactaaaccccaaccccttccagcctgggccaaaatcaccctttctgagcacccctccc
ttactgccgatgcccccaaacagtaccacccctccccagacacagaacaagatcaagtcc
tgtgagttctgcggtaagaccttcaagttccagagcaacttggtggtgcatcggcgcagc
catactggagaaaaaccatacaagtgccagctgtgtgaccatgcctgctctcaggcgagc
aagctgaagcgccacatgaagacccacatgcacaaggctggatccctgacggggcgctca
gatgatggattgtccaccacaagctccccagagcctggaaccagtgatgtgacaggtgag
ggcatgaagaatcgtgatggagacttccagggggaaggcaatgaggaggacgaagaggag
gaggaagaagaggaacttgagaatgaaagtcgaccggaatccaacttcagcatggagtct
gagttctaccggaacagggagaatggctctaaaccgccttcagaggagaagtcatcattc
gcccttgagaagatggtggaaggtggggggctcaactctatacagcagtacaataatttg
atagttgacaatcgtaaaaggatgcccttctccaagaggtgcttggatggccagcgggag
actggggatgaggactcagtggctggggagatggaccaccaccagcaggaagagaggaca
accattaatggccggaactgtggctccggtgactctttctcaggcctgtttccccgtaag
cccacccccatcaccagccccagcctgtccaactcctcaaataagaggatcaagattgag
aaggacttggacattcccccagcacctcacatcccctctgagaacgtctactcccagtgg
ttggtgggctatgccgcctcacgccacttcatcaaagaccctttcctaggcttcactgac
tccagacaatcgccctttgccacctcttctgagcactcgtctgagaatggcagcctgcgg
ttctcaacgcctccgggtgacctgctggatggcggcctgtcaggccgcagcggcactgcc
agtggaggcagcacgcctcacctgggtggaggccccggtccaggccgacccagctccaag
gacagcaggaggtgcgatacctgtgaattctgcggcaaggtgttcaagaactgcagcaac
ctgacggtgcacaggcgcagtcacactggtgagaggccctacaagtgtgagttgtgcaac
tatgcctgtgcccagagctccaagctcacacgccacatgaagacacatggccagcttggt
aaggaggtctaccgctgtgacatttgccaaatgcccttcagcgtgtacagcactctggag
aaacatatgaaaaagtggcatggagaacatttgatgaccaatgaggtcaaaattgaacaa
gcagagagaacctaa
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