Siniperca chuatsi (mandarin fish): 122861890
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Entry
122861890 CDS
T08948
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122861890
Membrane trafficking [BR:
schu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122861890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
122861890
NCBI-ProteinID:
XP_044022851
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All DBs
Position
LG15:complement(21828858..21852042)
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AA seq
1795 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETENLDRQGMFMGGGPDPDTISLASVTAVTTNVSNKRSK
PDIKMEPSSGRPVDYQVSVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNE
YFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYSQPEHQFYHKWALL
SDPDDISAGCKGYVKCDIAVVAKGDTIKTPHKANESDEDDIEGNLLLPEGVPAERQWARY
YLKIYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVQFAGQKGKTSVQKSCYEPIWN
EQIVFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFLDLRNISNDGDKGFLPTLGPAWVNM
YGSTRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPDITSSTEVQLEGVPNI
SETATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEIDGVAKPKMKGKKGGG
DGDEEETELIHNSSDEEMDDDGDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWW
QDQRRRLYNANIVDNIADKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSQGCSQYLSLA
NKDQNQSGRTKLDRERLKLCMSEVETIGQQAKAMRSQVKKSTVRDKIKLAQNFLSKLRFL
ADEPQHSIPDVFIWMISNGKRIAYARVPSKDILYSIIDEEKGKDCGKVKTIFLRIPGKKG
FGPAGWTVQSKIEIYLWLGLNRQRKDYLSGLPNGFEENKLSKGPGLPCSPPISLTYMMKQ
IFQLRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVEL
FGEACELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQI
YRGNCTAGEMLAAFELLQIGPNGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKYRIEVL
FWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELL
HPPLNIRVVDCRAFGRYTLVGSNAVTSLRKFIYRATDKQANNWSTTEEIIVVNMEPEPGF
KKMETVVKLDSCSDAVVKVEDDDKDGKGKKRKRKKGDEIEEEELDESMLDWWSKYFASIE
TLTEALKAQEAALSDSEDKDDMDIADGGDIKPDDSPVKGTKRGKGKKDKKKPAVDPFEKK
KPKLDELKVYPKELESEFDNFEDWLHSFNLFRGKGGDDDDQNVMDEDRIVGKFKGSLCMY
RVSDDMSRDMSFDSNMGMFQNIPHNDPINVLARIYVIRATDLHPADINGKADPYIAIKLG
KTEIKDKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKIDLEN
RFYSKHRATCGVTCNYAIHGYNVWRDPMKPTQILAKLCKDGKLDGPHYGPGGRVKVENRV
FMAPTEIEDENGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQG
RIEMWVDLFPKDMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFV
RGWLKGQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEY
KIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNETEMPMVSIFK
QKRIKGWWPFVARNEEDEFELTGKVEAELHLLTGEEAEKSPVGEGRNEPEPLEKPNRPDI
ALLWFLIPFKAAKHLVCDQYRWLTIKIVTALLLLAILALFLYNMPGYMVKKMLGA
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgtggacacaaggaggacagaaacggagatgagccagctatt
ctggagacagagaacctggatcgtcagggcatgttcatgggaggaggcccagatcccgac
accatctcactggcctcagtcacagccgtcaccaccaatgtatcaaataagagatcaaag
ccagacataaagatggagcccagttctggaagaccagtagattaccaagtcagtgtaaca
gtgattgaagccaggcagctggtgggactgaacatggatccaatggtctgtgtggagatt
ggagaagataaaaagtacacctcaatgaaggaatcaaccaactgcccatactacaatgaa
tattttgtgtttgacttccacgtccctccagatgttatgttcgacaaaatcctgaagttg
tctgtaattcactccaaaaatcttctgcgtagtggaacactggttggaacttttaaactg
gatgtcggcacaatctactcccaacctgaacatcaattttaccacaagtgggctttgttg
tctgaccctgatgacatctcagcgggttgtaaaggctacgttaagtgtgatattgcagtt
gtggccaaaggagacactataaagactccacacaaggccaatgaatcagatgaagatgac
atagagggcaacctcttattaccagagggggtgcctgcagagcgacagtgggctcgctat
tacctgaagatctacagagccgagggtctccccagaatgaacaccagcatcatggccaat
gtcaaaaaggccttcataggagaaaataaggacctggttgatccttatgtccaagtacag
tttgctgggcagaagggaaaaacatctgttcaaaagagctgctatgagcctatctggaac
gagcaaattgttttcactgagatgtttccaccactgtgcaagcgcatgaagatccagatc
cgtgactcagataaagtgaacgatgttgctataggaactcacttcctggacctgcggaat
atttccaatgatggggacaaaggcttccttcccacgttgggacctgcctgggttaacatg
tacggatccactcgtacctacaccctgatggatgagtaccaggagttaaacgaagggctc
ggagagggagtgtctttcagggcccgtctgctcatcagcctgggcgtggagatcctggac
ccctcctcgcctgacattaccagttccacagaggtgcagttggagggagtacccaacatc
tcagagactgctaccgggaaggttgaggaatttttcctctttgggtctttcctggaggcc
acaatgattgacagaaagattggtgataagcccatcaactttgaggtcaccataggttac
tatggaaacgagattgatggggttgccaaaccaaaaatgaaggggaagaaggggggagga
gatggtgacgaagaggaaactgaactgatccacaactccagtgatgaggagatggatgat
gacggggacctgacttcagtggctactactcctcccatgaagcctgtcatcactgaccga
aactacttccacctgccatattttgagaggaagccgtgtatctacatcaagagttggtgg
caggaccagagaaggaggctgtacaatgccaacattgtagacaacattgcagataaactg
gaggatggacttaatgatgtgcaagagatcatcaagacagagaagacctatcctgagcgc
agactgagaggcgtcctcgaggaactcagccagggctgcagtcagtatctttcgctggca
aacaaggaccagaaccagtctggcagaaccaaacttgacagggagagactgaagctgtgc
atgtcagaagtggagaccatcggccagcaagctaaagccatgaggtcccaggtgaagaaa
agcacagtaagagataaaatcaagctggctcagaacttcctctcaaagctgcgcttcttg
gctgatgaacctcaacacagcattcctgatgttttcatatggatgataagtaatgggaag
cgcattgcctatgcgcgtgttccttccaaagacatcctttattccattatagacgaggag
aaaggaaaggactgtggcaaagtcaagacaatctttctgaggatccctggtaagaaaggt
tttgggcctgctggctggacagtccagtccaagatagagatttatctgtggctgggtctg
aatagacagcgcaaagactacctgagtggcctgcccaatggatttgaggaaaataagttg
tccaaaggacctggtctcccgtgctcacctcccatcagcctcacctacatgatgaaacag
atcttccagctgagggtccacatgtaccaagctcgcagcctgtttgctgctgatagcaca
ggtctgtctgatccctttgcaagagtcttcttctcaacacaaagccaggtcactgaggtg
ctggctgagactctgtgtccgacatgggaccaactgctggtctttgagaatgtggagttg
tttggagaggcctgcgaactgagagacgaccctcctattatcgtcattgaaatctatgat
caagacacagtgggtaaagctgacttcatgggcagaacatttgccaagcctgtggtcaag
atggcggacgagcactatggtcccccacgcttccctccccaactggagtactatcagatc
taccgtgggaactgcaccgctggagaaatgctggcagcctttgaattgctacagattggc
cccaatgggaaagctgacctgccacccatagacggtcccacagatatggaccgcggccca
atcctgcctgtaccactggggatcagaccagtgctcagcaagtacaggattgaggttttg
ttctggggattgagggacttgaagagggtgaatctggcccaggtggatcggcctcgtgtg
gacattgaatgtgccggaaagggagtacagtctgccctcatccccaactacaagaaaaac
cccaacttcagcacccttgtcaagtggtttgaagtggatttgcctgagaatgagttgctt
cacccgccactgaatatccgagtggtggactgtagggcttttggccgctacactctggtt
ggctccaatgctgtcaccagcctgcggaagttcatctacagggcaacagacaaacaggcc
aacaactggtccactactgaggaaattattgttgtcaacatggaacctgagcctggtttt
aagaagatggaaactgtggtcaaactagactcttgctctgatgctgttgtcaaagttgag
gatgatgataaagatggaaaggggaaaaagaggaagaggaagaagggtgatgagattgaa
gaggaggaacttgatgagagcatgttggactggtggtccaaatattttgcctccattgaa
actttgacagaggctctcaaagctcaagaagctgctctttcagattcagaggacaaagat
gacatggacattgcagatggtggagatatcaaacctgatgactctcctgtgaaaggcacc
aagagaggaaaaggaaagaaggacaagaagaagccggcagtcgatccgttcgagaagaaa
aagccaaagctggatgagctgaaggtgtaccctaaggaactggagagtgaatttgacaac
tttgaggactggctccacagttttaacctgttcaggggaaaaggtggcgatgatgacgac
caaaacgtgatggacgaggacagaattgtcggaaaattcaaaggctcactgtgcatgtac
agagtgtcggatgacatgtccagagacatgagcttcgactccaacatgggaatgtttcag
aacattcctcacaacgatcccattaatgtccttgcccgcatctatgttatcagggcaact
gatctgcatccagctgacattaatgggaaagctgatccatacattgcaatcaaactggga
aagacagagatcaaagacaaagagaactacatctcaaaacagctgaaccctttgtttggc
aagtcctttgacgtggaggccacattcccaatggattccacactcacggtgtcaatttac
gactgggacctggtgggaactgatgatctgattggagaaaccaaaattgaccttgagaac
cgtttctacagcaaacacagagccacatgtggtgttacatgtaactacgccatccatggt
tacaatgtgtggcgggacccaatgaaacccacacaaatcctggctaagctgtgcaaggat
ggcaaactggatgggcctcactacggccctggaggaagggtgaaggtggagaaccgtgtc
ttcatggcaccgactgagatagaggatgaaaatggtttgaagaagcagacagatgaacat
ctggctctgaccgtgttgaagcactgggaggaaatcccacgggtcggctgcaaacttgtc
ccagaacacgtggaaaccagaccactgctccaccctgataaaccaggaattgaacaaggg
cgaattgaaatgtgggtggatctgttccctaaggatatgactgcacctggccccgccctt
gacatttcaccaaggaaaccaaagaagtttgaactgagggtgatcatctggaacacagat
gaggttgttctggaggatgatgatatcttcactggcgagaaatcgagtgacatatttgtg
cgaggctggttgaaagggcagcaggaggacaagcaggacacagatgtccactaccactcc
atcactggggagggcaacttcaactggcgcttcgtctaccccttcgactacctcatggct
gaagagaagatcgtcatctcaaaaaaagagtccatgtttgcctgggatgagactgaatac
aagatcccagctcgtcttaatctgcaagtgtgggacgctgatcatttctctgcagatgac
ttcttaggtgcaattgagctggacttgaaccgttttccacgtggcgcgaagactgccaag
cagtgcaccattgagatggtgacaaatgaaacagagatgcccatggtctccatcttcaaa
cagaagaggatcaaaggctggtggccatttgtggccagaaatgaagaagatgagtttgaa
ctcacgggaaaagtggaagcagagctgcaccttctgacaggagaggaagcagagaaaagc
ccagttggtgaaggacgcaacgaaccagagccactggagaaacccaaccgtccagatatt
gccctcctctggttcctcatccctttcaaagctgcgaaacacctggtgtgcgaccagtac
aggtggctgaccatcaagattgtcactgctctcctgctgctggccattttggctcttttc
ctttacaacatgcctggttacatggtgaagaaaatgttgggggcttga
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integrated database retrieval system
