Siniperca chuatsi (mandarin fish): 122862929
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Entry
122862929 CDS
T08948
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
122862929 (dse)
Enzymes [BR:
schu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
122862929 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
122862929
NCBI-ProteinID:
XP_044024733
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All DBs
Position
LG16:3234077..3271374
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AA seq
957 aa
AA seq
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MRTHTRGAPTVFFISLLWPLLAPVVAAATEVDPSGGIPFMGGNYDGHPMLYFSRGDVEEM
QYAAAGTHRDMARRIREAGETMLEHPEEYLPPWSPAEFSARWNEVYGNNLGVLSMFCLLY
PHRAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQQER
FLQVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQV
LSIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFAIGHFDHPWLLKHFAF
LYRTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADLIHQNRVMEGPG
QAGKGQRWCTLHTEFIWYDPGLIPKPPSDFGTSQLHYFEDWGVVTYGSALPADTNCSFLS
FKSGKLGGRAIFDIVHRNKYKEWIKGWRNFNAGHEHPDQNTFTFAPNGVPFITEALYGPK
YTLLNNVVLFGSAMSGSCFKPWAGQVTEACDSKWLKYKVGLAADAQGRVEAAMERQGMVF
IRGDGHSAYNPELKIRTFQRNLLLLHPQLLLLVDHIHLDPDSPTRAMSAFFHNTELPFQS
TKVDGVHGVFVSHGEDKYKMFWMDDTGYSNKGVVGYWNYPRGYPYNGSNFVNVTMPLRYP
HTRVAYIFFGPGVDVQSFSLRGDEERVDIYLATKDHTYTIYLLTGEVTSKPLFAMVLLDH
KKIIFEKAAAAVDSSPEEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNTASFRKTAER
LLQFSDKKKTEEVIEKMFFMSKKQGKGKGGKKVNLGEKLSESLPDIFAQIEVNEKKERQR
TSKRTYEDSPEEGDADSRAFIDYTDRKNRKGDFVKGRKFKEVHMVATAGSEGLSSTASYI
RLFLLLNTATFFLLLAVLLTRFQRGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQC
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccacacccgcggggcccccacagtcttcttcataagtctgctgtggcctctg
ctcgccccagtggtggcggcagcaacggaagtggaccccagcggaggaatccccttcatg
ggaggcaactacgatggtcatcccatgctatacttcagtcggggggatgtggaggagatg
cagtatgcagccgcagggactcatcgggacatggcgaggaggatccgcgaggctggtgaa
accatgctggagcaccccgaggagtacctgccaccctggagccccgcagagttcagcgct
cgctggaacgaggtgtacggaaacaacctgggtgtgctgtccatgttctgcctgctgtac
ccacacagggctggggccctcgacctggccaaggactacatggagaggatggcggctcag
cctagttggttggtcaaagatgccccctgggatgaagttcctttggcgcactctttggtc
gggtttgccactgcttacgacttcctgtatgagtacttgaacaaggggcaacaggagcgt
ttcctccaggtgattggcaatgcgtcacgcctgatgtacgagaagtcctacgtccgaggc
tgggggttccagtacctgcacaaccaccagcctaccaactgtgtggctctgctcacagga
agcctggtttacatgacccaaggttacctccaggaggcctacctgtggaccaagcaggtc
ctgtccatcatggagaagtccatggtccttctacaggatgtgacggatggctccctgtat
gaaggggtggcctacgggacttacaccacccgctctctgttccagtacatgtttctggtg
cagcgccactttgccattggccactttgaccacccctggctccttaaacactttgccttc
ctgtacagaactatcctgcctggatttcagcggactgtagccattgcagattccaactac
aactggttctatgggccagagagccagctggtcttcttggaccgctatgtgttgcgtaat
ggcagtggaaactggctggcagatctgattcatcaaaacagggtgatggaagggccaggg
caggctggaaaaggccagcgatggtgtactctccacacagagttcatctggtatgacccg
ggcctaattcccaagcctccatcagattttggaacatcccaactccactactttgaggac
tggggtgtggtgacatacggcagtgctttacctgcagacaccaactgctcctttctctct
ttcaagtcggggaagcttgggggacgcgccatctttgacatcgttcacaggaacaagtac
aaagagtggatcaaagggtggaggaactttaatgctggccatgagcaccctgatcagaac
actttcacttttgcacccaatggtgtcccattcatcactgaggcactgtacggacccaaa
tacactttgttgaacaatgtggtgttgtttggctcagctatgtcagggagttgctttaag
ccatgggctggacaggttacggaagcctgcgattccaagtggttgaagtacaaggtgggg
ctggcggctgatgcccagggcagagtagaagctgctatggagagacagggaatggtcttc
atccgtggtgatggacattctgcttacaatccagagctgaagataaggaccttccagaga
aacctgctccttcttcacccgcagctcctgctccttgtggaccacatccacctggatcca
gacagcccaacaagggccatgagtgccttctttcacaacacagaacttccattccagagt
acaaaggtagatggtgttcatggagtgtttgtctcacatggtgaagacaagtataagatg
ttctggatggatgacacaggctacagtaacaaaggagtggtaggttactggaattaccct
cgagggtacccatataatggctctaactttgtgaatgtcacaatgccattaaggtatcct
cacaccagggtggcctacattttctttggaccgggcgtggatgtacagagcttcagcctg
cgtggcgatgaagagagagtggatatttacctggccaccaaggatcacacctacaccatc
tacctgctgactggggaggtcaccagcaagcctctgtttgccatggtgctgctggaccac
aagaagatcatattcgagaaggcggcggctgcagtggacagctcgcctgaggaagtagag
gaatatgtcaacgtgatggaggacaacctccagcacgtcaagcccgtcttccagcagatg
gagagacacatcttaggacgggttctcaacactgccagcttccgtaagactgcagagcgc
ctcctccagttctccgacaagaagaagacagaggaggtcatcgagaagatgttttttatg
tctaaaaaacagggcaagggtaaaggggggaagaaagtgaaccttggggagaagctttcg
gagagtctacctgacatttttgcacagattgaggtgaatgaaaagaaggagagacagagg
acttcaaagcgaacatatgaggacagtccagaggagggggatgcagactctcgggccttt
atagattatacagaccgcaaaaacagaaagggggactttgtcaagggccgcaaattcaaa
gaggttcatatggtggccactgcagggagtgagggtctctccagcacagcctcctacata
agactctttctcctcctgaacactgccaccttctttttgctgctggctgtgttactgact
cgctttcagaggggtcgaagcttacacacgcagagatgtttctacaccatccttctgatt
gactgcttcatcttactgtacctctactcctcctgctctcacacacagtgttaa
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