KEGG   Siniperca chuatsi (mandarin fish): 122864206
Entry
122864206         CDS       T08948                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu04010  MAPK signaling pathway
schu04060  Cytokine-cytokine receptor interaction
schu04150  mTOR signaling pathway
schu04210  Apoptosis
schu04217  Necroptosis
schu04350  TGF-beta signaling pathway
schu04620  Toll-like receptor signaling pathway
schu04621  NOD-like receptor signaling pathway
schu04622  RIG-I-like receptor signaling pathway
schu04625  C-type lectin receptor signaling pathway
schu04920  Adipocytokine signaling pathway
schu05132  Salmonella infection
schu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:schu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    122864206 (tnfa)
   04350 TGF-beta signaling pathway
    122864206 (tnfa)
   04150 mTOR signaling pathway
    122864206 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    122864206 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    122864206 (tnfa)
   04217 Necroptosis
    122864206 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    122864206 (tnfa)
   04621 NOD-like receptor signaling pathway
    122864206 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    122864206 (tnfa)
   04625 C-type lectin receptor signaling pathway
    122864206 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    122864206 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122864206 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122864206 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:schu04052]
    122864206 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:schu00536]
    122864206 (tnfa)
Cytokines and neuropeptides [BR:schu04052]
 Cytokines
  Tumor necrosis fators
   122864206 (tnfa)
Glycosaminoglycan binding proteins [BR:schu00536]
 Heparan sulfate / Heparin
  Cytokines
   122864206 (tnfa)
SSDB
Motif
Pfam: TNF DUF7926
Other DBs
NCBI-GeneID: 122864206
NCBI-ProteinID: XP_044027370
LinkDB
Position
LG17:27096870..27100280
AA seq 242 aa
MEGECKVLLDAAVDTEARKQTMQSVKPSSKLTTALLAFTLCLTGAAAVLVFNRHAKGPGR
DEDNFDLRHTLRQISNVRAAIHLQGEYNPDMNTSVEWKNQVDQSHSQGGLELNNNEIVIP
QNGLYFIYSQASFRVSCSSSDADDTTSNSMVHLSHTVKRWSTSYGNDDAKKSYQTILHSV
RTACQKTASSDLDQEGSWFSAVYMGAVFNLKKGDRLKTVMDKKMLPYLEDEPGKTFFGVF
AL
NT seq 729 nt   +upstreamnt  +downstreamnt
atggagggtgaatgcaaggtactgctggacgccgctgtcgacacagaagccagaaaacaa
acgatgcagagtgtcaaacccagctcaaagctaaccacagccctactggcgttcacactc
tgcctcactggtgctgctgctgtcctcgtcttcaacaggcatgccaagggcccaggacga
gatgaagacaattttgatcttcgtcacacactgaggcaaatttcaaatgtaagagcagcc
attcatttacaaggagaatacaaccctgacatgaatacctcagtggaatggaagaatcag
gtggaccagtcccactctcaaggaggcctggagctcaacaacaatgaaattgtgattcct
caaaatggcctctacttcatttacagccaagcgtctttccgggtcagctgcagcagcagt
gatgctgatgacaccacctctaattccatggtccacctgagccacactgttaagcgctgg
tccacctcgtatgggaacgatgacgccaagaagtcctaccagaccatcctgcactctgtc
cgcactgcctgccaaaagacagccagcagcgatctggatcaagaggggagctggttctcg
gccgtgtacatgggagctgtgtttaacctgaagaaaggggacagactgaagacggtgatg
gacaagaagatgctgccctacctggaggacgaaccggggaaaactttctttggtgtgttt
gccctgtga

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