Siniperca chuatsi (mandarin fish): 122864240
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Entry
122864240 CDS
T08948
Name
(RefSeq) H-2 class I histocompatibility antigen, L-D alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
schu04145
Phagosome
schu04218
Cellular senescence
schu04514
Cell adhesion molecules
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122864240
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122864240
04145 Phagosome
122864240
09143 Cell growth and death
04218 Cellular senescence
122864240
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122864240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122864240
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
122864240
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122864240
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
Antigens
122864240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
Ig_3
Insulin_TMD
Ig_2
Motif
Other DBs
NCBI-GeneID:
122864240
NCBI-ProteinID:
XP_044027437
LinkDB
All DBs
Position
LG17:2566535..2576629
Genome browser
AA seq
411 aa
AA seq
DB search
MNRPTTWMFLFLPLMWLNLQPTVSEKHSLTYIYTALSKPVGLPGIHDFTAMGLLNDRMID
YFDSENQKKVPKQTWMKERLPADYWDKGTQSRQSKQQWFKVNIEILMQRMRQNDTDVHVL
QWMHGCEGVTQPDGEIKFQRGMDMYNYDGNDFLSFDDAHEVWVAPTQEAEQTKRKWDEVQ
VLKEYTKGYLENECISWLSKFVKYEQNQLQKASAPAVYLYTKKTRVEANIILTCLATGFY
PKDIVLQIKRNGRVLTREDGLISSGVRPNEDETFQRRDSVEILRSDVSTYTCEVNHPGSR
LHVEKVWDHTLPGSGGTIIGAVVAVVLVVLIIGVVLAVLYKKGVIGNKTNKGSEESLSSG
DSGDTGSQNPTPASSITGSSITGSSITGSSTPGSTAPESQSLLKGNAAEQA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccaacaacctggatgtttttgtttcttccgttaatgtggctgaatttacag
ccaactgtaagcgagaagcattccctcacttacatctacacggccctctccaaacctgtc
ggactccccggcatccatgacttcacagccatgggtctgctgaacgacaggatgatcgac
tactttgacagtgagaaccagaagaaagttcccaaacagacctggatgaaagagcgactg
cctgcagattactgggacaaaggcacacagtcccgccagagcaagcagcagtggttcaaa
gtcaacatcgaaatcctgatgcaacgaatgagacagaacgacaccgacgtccatgttctt
cagtggatgcacggctgtgagggcgtaacgcagcccgacggcgagattaagttccaacgc
ggcatggacatgtacaactacgacggaaacgacttcctgtccttcgacgacgcccacgaa
gtctgggtcgccccaactcaagaggccgaacagaccaagaggaagtgggatgaagtccag
gtcctaaaagaatacaccaaaggctacctggagaacgagtgtattagttggttgagcaag
ttcgtgaaatatgagcaaaaccagctacaaaaggcctctgctccagcggtgtacctgtat
acaaagaagaccagagttgaggcaaacatcattttgacgtgcctggccacaggtttctac
ccaaaagacatcgtcctgcagatcaaaaggaacggccgtgttctaacgagagaggacgga
ttgatctcctcgggcgttcgaccaaatgaagacgagaccttccagaggagagacagcgtg
gagattttaaggagtgacgtgtctacgtacacctgtgaagtgaatcaccctggatccagg
ttgcatgttgagaaggtctgggatcatacacttcctggctctggaggaaccatcattggt
gcagtggtcgcggtggtcctggttgtgctcataatcggtgtggtgctggctgtcttgtac
aaaaagggcgtgattggcaacaagaccaacaaggggtcagaagagtctctgagcagcggt
gactctggcgacacgggcagccaaaaccccacccccgcgtcctccatcaccgggtcctcc
atcaccgggtcctccatcaccgggtcctccacccccgggtccaccgcccccgagtcccaa
agtctcctgaagggaaatgcagcggaacaagcctga
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