Siniperca chuatsi (mandarin fish): 122864399
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Entry
122864399 CDS
T08948
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
schu04145
Phagosome
schu04218
Cellular senescence
schu04514
Cell adhesion molecules
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122864399
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122864399
04145 Phagosome
122864399
09143 Cell growth and death
04218 Cellular senescence
122864399
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122864399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122864399
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
122864399
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122864399
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
schu00537
]
Antigens
122864399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
Baculo_11_kDa
DUF3671
ig
ECSCR
Orf78
Tmemb_9
AMA-1
DUF3139
C2-set_3
I-set
EssA
TMEM154
DUF4389
Motif
Other DBs
NCBI-GeneID:
122864399
NCBI-ProteinID:
XP_044027695
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All DBs
Position
LG17:4966369..4978005
Genome browser
AA seq
394 aa
AA seq
DB search
MKKLFLLLLFCHVSSPVKHTLKFFYTASSGVPNFPEFVAAALVDDLLVGYCDSNKNIVEP
KQDWVKKLFEDDPQHLKLYIGECVENQPNSLKKRMDNLKQRFNQSGGVHVLQRMNGCEWD
DETGEVTYGFNQYGYDGEDFISFDLKTLTWIAPKPQAFNTKLRWDAEKARIKYIENDLTE
IFPEWLKKYVAFGKSSLLRTELPSVSLLQKTPSSPVSCHATGFYPDRVEMFWRKDGKQLH
EEVEHGEILPNHDGSFQMSVNLKLSSVTPEDWRRYDCVFHLSGVKDDIVTRLDKAVIRTN
EGKTGIRNDEAGKPSDMILIIIAVIIVVVVVFFLVLIAVIGFIIYKKKNAKYAQPSKSPP
DGSEISSGSSSASSRESLTSARPLIKEGQFEDGG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttatttttgttgcttctcttctgtcacgtttcatcaccagtgaaacacacc
ctgaagtttttctacactgcatcttctggagtcccaaacttcccagagtttgtggcagct
gcactggttgatgaccttcttgtgggttactgcgacagcaacaaaaacatagtagaacca
aaacaggactgggtgaaaaaattattcgaagacgatcctcagcacttgaagctttacatt
ggagagtgtgtcgagaatcagccaaactccttaaaaaagaggatggataatttgaagcag
cgcttcaaccaaagtggaggtgtccatgttttacagaggatgaacggctgtgagtgggat
gatgagactggagaggttacgtacggttttaatcagtatggttatgatggagaagacttc
atatcattcgacctgaagacattgacatggatcgctccgaaaccacaggctttcaacacc
aaactgagatgggatgctgagaaagctagaataaaatatattgagaatgacctcactgag
attttccctgagtggctgaagaagtatgtggcctttgggaagagctctctgctgagaaca
gagcttccctcagtgtctctcctccagaagactccctcctctccagtcagctgccacgct
acaggtttctaccctgacagagtcgagatgttctggaggaaagatggaaagcagcttcat
gaggaggtggagcacggagagatcctccccaaccacgatggatccttccagatgagtgtt
aacctgaaactttcatcagtcacacctgaagactggaggaggtacgactgtgtgtttcat
ctctctggtgtgaaggacgacatcgtcaccagactggacaaagcagtgatcaggaccaac
gaaggtaagactggtatcagaaatgatgaagcagggaagcccagtgacatgatcctcatc
atcattgctgtcatcattgttgtagtggttgttttttttctcgtcctcatcgctgtgatt
ggattcatcatttataaaaagaagaatgccaaatatgctcaaccctctaaatctcctcca
gatggatcagagatttcttcaggtagttcttctgcttcttctagagaaagtctaaccagc
gccagaccactgatcaaagagggacagtttgaagatggaggatga
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integrated database retrieval system
