Siniperca chuatsi (mandarin fish): 122865536
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Entry
122865536 CDS
T08948
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04137
Mitophagy - animal
schu04141
Protein processing in endoplasmic reticulum
schu04210
Apoptosis
schu04217
Necroptosis
schu04621
NOD-like receptor signaling pathway
schu04622
RIG-I-like receptor signaling pathway
schu04920
Adipocytokine signaling pathway
schu05132
Salmonella infection
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122865536
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122865536
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122865536
09143 Cell growth and death
04210 Apoptosis
122865536
04217 Necroptosis
122865536
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122865536
04622 RIG-I-like receptor signaling pathway
122865536
09152 Endocrine system
04920 Adipocytokine signaling pathway
122865536
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122865536
09171 Infectious disease: bacterial
05132 Salmonella infection
122865536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122865536
04121 Ubiquitin system [BR:
schu04121
]
122865536
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122865536
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122865536
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122865536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
SlyX
ATG16
zf-RING_6
Dynamitin
DUF3138
Motif
Other DBs
NCBI-GeneID:
122865536
NCBI-ProteinID:
XP_044030042
LinkDB
All DBs
Position
LG18:5115798..5126793
Genome browser
AA seq
600 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCNACIKEDIFEETTSILKQGCAFPDNAVRREVEHLSAVCINESCTWKGTIKE
YEMNHEGKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAAAAASSSSSSSGPSGPPASAPLPPPPTLPPTLSVSTSFTPLPSSVGAALELQLHSE
KTKVVELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKV
RQLERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAF
YTSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNRE
HIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggaaccatcccctccttcgtccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgtcacaatata
ctcagacgaccgtttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
actgtgagtaatggaccccagaaatgcaatgcctgcattaaagaggatatttttgaggag
actacatcgattttgaaacaaggatgtgcttttcctgacaacgcagttcgaagggaagtt
gaacacctttcagctgtttgtatcaatgaaagttgcacttggaaaggcactattaaagag
tatgagatgaaccacgaggggaagtgtgagttcatgatcatcccctgcccctcttgtaaa
gaacgaattcgcttcaacgagcaggagcgccataatgagcgagagtgcccggaaagaact
ctcaactgcaagtactgcaaggagccattccacttcaaaaatatcaaggcacatgacgag
atctgtcccaagtacccgatgatctgtgaaggctgtgccaagaagaaaatacccagagaa
aagtatgtggaccatattaagttctgcagcaaattcagaactccgtgtcgatttcatgtc
gtgggatgtgatatgtctgtggaaaaggaaaagattcatgaccatgagcgcgcctatgcc
tacgagcacctcaatctgttgctgcactacattatgggcatgaaagtgagcatggagggc
ctgcagccccagggactggaactagccggacacaaactggtggaactccaacagtccctc
agggagctcgaggccagagtctcccagcttagcaccacctcctctgggcctcccgtgcag
ggagccgccgccgccgccgccgcctcctcctcatcctccagctctggtccctctggtcca
cccgcttcagctcctctccctccaccgcccactctgcctcccactctgtctgtgtctacc
tccttcacacccctgcccagctcggtgggtgcagcgctggagctccagctccacagcgag
aagaccaaggtggtcgagctgggtcgcaggtgtacggaacttgaagttaaagccggcaca
tttgaaaatgtggtgtgtgtcctgaacagagaggtggagaggtttgccaccaccatggaa
gccagcaaccgtcagcacaaactggaccaggataagatcgaggctctgagtaataaggtg
cgacagctggagaggacagtggggctgaaggacctaacagttgcagagatggagggccgg
ctgagggaaatgtctgccactacttttgatggtgtctttgtctggaggatctctgatttc
gccaaaaagagacaggatgccatcgcaggtcgagcccctgccatgttttcaccagccttc
tataccagtaagtacggctataagatgtgtctgcggatctatctgaatggagatgggaca
gggcgtggcagccacttgtccttgttctttgtggtgatgaggggactgagtgacgctctg
ctcaaatggcctttcaaccagaaggtgactctgatgctgctggaccagagcaacagggag
cacatcatcgacgcctttcgacctgatgtcacttcctcttccttccagagaccagtgagc
gagatgaacatcgccagcggatgtccgctcttctgcccgctctccaagctcgatgccaag
aactcttacatccgcgacgacaccatcttcatcaaggcaatcgtggacctcaccggcctc
tag
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