Siniperca chuatsi (mandarin fish): 122867196
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Entry
122867196 CDS
T08948
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03440
Homologous recombination
schu03460
Fanconi anemia pathway
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122867196
09124 Replication and repair
03440 Homologous recombination
122867196
03460 Fanconi anemia pathway
122867196
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122867196
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122867196
03036 Chromosome and associated proteins [BR:
schu03036
]
122867196
03400 DNA repair and recombination proteins [BR:
schu03400
]
122867196
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122867196
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122867196
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122867196
Multi subunit type E3
BRCC complex
122867196
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122867196
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122867196
BRCA1-A complex
122867196
BRCA1-B complex
122867196
BRCA1-C complex
122867196
BRCA complex
122867196
FA (Fanconi anemia) pathway
Downstream FA components
122867196
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-ANAPC11
zf-MIZ
PTCB-BRCT
zf-RING_4
zf-RING_10
zf-rbx1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122867196
NCBI-ProteinID:
XP_044033591
LinkDB
All DBs
Position
LG20:complement(11584083..11606140)
Genome browser
AA seq
1505 aa
AA seq
DB search
MLPLNMSRRRRVAGKLKRMIPVLITANCKKKSFLKITMKPPKATDVKKGISVLWETLQCP
ICLDLMTAPVSTKCDHQFCKFCIMKLLDNTKQNRANCPVCKAKITKRSLQESPGFQRLVV
GLQDMIQAYEHDTGTNYLTGMSQQKGQSGFTDTEATKHRHDVSSGDTPGTDCDDMENVDN
NGLPRSHSSTIAAQNGFARLMGLEDTSPLTTENEGLDSGLGDAPPTSDKKMHSPTDNLDP
LETEMSEVVEKATSTHKTRDKMRLPKSEKASLHPSLIPDETENQPLRKSSRKKPEKDLEP
DKIFNQKQKKSLEKVAEWLMKVPTEGSLELEKPNEDTDDSDSCSSTSTIDVKQLTSDLNP
RREDRAKALEEQVFGAVYKRERRGNKTISPPLNVFVEPPTTKETQTPETVSKRRKKNTLT
SADFVKKSSSVDKNESDMEEEQQLIEVNDTSRDIFKEAEQIEVMEENDIDKYGEELNNFP
ESDKNNGKDEVPCPVSDIGQQQPERKSKKRTHNTLQQVDSDLQEQAKAKSESTEQKITDK
RKGKNKRSEKGKPARVPKPLVLVGVQNGETSPKTRLRSEEVQVHIENYPSSEDQEIPVTR
SNRRSRRLQLFAEEVQEGHKKANLKVNIPEKDSNVAEQSEDAKGGSLDNTASPKHGNMTK
VAERNGCIYDQDLGGIDNMESGVRTSYLRPTEYAEESIAEVPNAETLSEAGAICYVPVVP
SSASPTEAAVVDATLESDNPKNHFPNSVQLETSACETKCAGIENEEDKNDSELDTEQLLW
SFKATKRKSFHLGGPNVKRSRSLDQENVQVAEAEANQCVCSGVESAKNLIYTKRSEITNQ
EALRENENSSCSDFISPTNSPVLTRKTVVEKPDQVVVEASIPDSSCSGQDSAGENCISRN
SVSSALTPNKVSKRERESPHLSVVPQVVDSGLCFTAIEHEALNEPSTYSQITENRLDCTM
RDAGKVEEITDSSSTASGKHPGNTAEQFLNAEYSLTPDGLGIPVVQTVREAKSYSSGSGE
LSVHSSIKSMPRKRTRAQRLDSSSESDCSGEGLPTLNQIFGTSAPPSAVTQDQGDSSEAN
RCEGVTADGAERLSRPPACPSPDCVNSSQASVDLFGTPECDVPVNDIGVSMESSQFSSEV
LVTQQKIEMQKELVRLEKLMALVSEVLHEKEESPAKEVPSKTNQSSKTTGPDAHRPLPCD
QDTGQGSDQKAVPEAEREPSTRTSDGKGVTQPSVSKHGSIAEMAVQRSTRIANSVTGTGA
SKTLRSSSAAKTLNNNGSPSDGQEDKENNNPPRERSKAKMVLVSSGLSPNEQIMVKKFAK
RVGACVVSQVTPEVTHIIMHTDEQLVCERTLKYFLGIAGRKWVVSFQWISECFKQKKLLD
ENLFEVRGDVVNGPNHQGPMRARTTEDNNLLMKGYKICFQGPFTDMTTDEMEWMVELCGA
VIVKDPLLFNSKQKSHQLVIVQPGSESSSSSTYSCLSRQATVVTRGWLLDTVATYTLQNF
NKYTT
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgttaaacatgagtagaagaagacgagttgcgggaaaactgaagcggatgatt
cctgtgttgataaccgcaaactgtaagaaaaaaagctttttaaaaatcaccatgaaaccc
ccaaaggccacagatgtcaaaaaggggatttcagtcctttgggagactctgcagtgtccc
atatgcttggatttaatgactgcacctgtatctactaagtgtgaccatcagttttgcaaa
ttttgtataatgaaacttttggacaacaccaaacaaaacagggctaactgtccagtgtgt
aaagccaagataaccaaaaggagcttgcaggagagccctgggtttcagagacttgtagta
ggattgcaggacatgatacaggcatatgaacatgacactggcacaaactacttaactgga
atgtcccagcaaaaaggacaatcaggattcacagatactgaagctactaaacatcgtcat
gatgtgtcatctggagatacacccgggactgactgtgacgacatggaaaatgtcgacaat
aatggtcttccaaggtctcactcctcaactatagcagcccagaatggatttgcaagactt
atggggcttgaagacacaagtccgttgacgacagaaaatgaaggcctggacagtggcctt
ggggatgccccaccaacttctgataagaaaatgcacagccctacagataatttggatcca
ctggaaacagaaatgtcagaagttgtggaaaaggcaacatcaacacacaaaactagggac
aaaatgagattacccaaatcggagaaagcctcccttcatccatcattaattccagacgag
accgaaaaccaacctttaagaaagtcctcaaggaagaagccggaaaaggatttggagcct
gacaagatttttaaccagaaacagaagaaaagtctagagaaagtcgcagagtggctcatg
aaagttccaactgaaggaagtctcgagttagagaaacccaacgaagacaccgatgactct
gacagctgttcttccacttcaacaatagatgtcaagcaactcactagtgatctgaatcct
aggagagaagatcgtgctaaagcacttgaagagcaggtgtttggggccgtctacaaacgg
gagcgaagagggaacaagaccatctctcctccacttaatgtttttgttgaaccaccaaca
actaaagaaacacaaacacctgaaacagtttccaaaagaaggaagaaaaacactctcact
tctgctgattttgtaaagaaatccagctctgtagataaaaatgaaagtgacatggaggaa
gagcaacaattgatagaagtaaacgacaccagccgggacatttttaaagaagcagaacag
attgaggtcatggaggaaaatgatatagacaaatatggggaagagttgaacaactttcca
gaaagtgacaagaataatggcaaagatgaggttccctgtcctgtgtctgatattggacaa
cagcaaccagaaagaaagtcaaagaaaaggacgcataacactttgcagcaggttgacagt
gatttgcaagagcaagctaaagcaaagtcagaaagtactgagcaaaagataactgacaag
aggaaaggtaaaaataaaaggtcagaaaaaggcaagcctgctagagtgccgaaacctctt
gttttggttggagttcaaaatggagaaaccagtcctaagactagactaaggtcagaagaa
gttcaagttcatattgagaattaccctagcagcgaagaccaagaaatccctgtcacgagg
agcaacaggagaagtagaagacttcaactcttcgctgaggaagtccaggaaggtcacaag
aaagcaaacttgaaagtcaatatacctgaaaaagacagcaatgttgcagagcaatctgaa
gatgctaaaggtggatcactggataatacggcatcacctaagcatggaaacatgacaaag
gtggctgaaagaaacggatgtatttatgatcaagatttgggaggaatagataacatggag
tctggtgtcaggacatcttatttgagaccaacagaatatgctgaagagtccattgctgaa
gtgccaaatgctgaaactttgtctgaagctggtgccatttgttatgtccctgtggtccca
agctctgcgagtccaactgaagcagctgtagtagatgcaacccttgaaagtgacaatcca
aagaatcatttcccaaacagtgttcagttggaaacctccgcttgcgagactaaatgtgct
ggaatagaaaacgaggaggataagaacgacagcgagctggacacagagcaactgctctgg
agcttcaaagccactaaaaggaaatctttccatcttggtggtccaaatgtgaaaaggagc
cgtagtctagaccaagaaaatgtgcaggttgctgaagcagaggcgaaccagtgtgtttgt
tctggtgttgaatctgcaaaaaatctgatatatacaaagagatctgaaatcaccaaccaa
gaggcattaagagagaatgaaaactcatcttgtagtgattttatctcccctactaactca
cctgtcctgacaagaaaaacagttgttgagaaaccagatcaagtggtggtagaagcctcg
atccctgatagcagttgttcaggtcaggacagcgctggtgagaactgtatctccaggaat
agtgttagtagtgcccttactcctaataaagtgtcaaagcgtgaaagagaaagtcctcat
ctttctgttgtgcctcaggtagtagattctgggctctgcttcacagccattgaacatgag
gcactaaatgaaccctcaacatattctcaaattacagagaatcggcttgattgtaccatg
agggatgctggcaaagtggaggagataacagacagcagttcaaccgccagtggaaaacat
cccggcaacaccgctgaacaatttttaaacgcagagtactctttaactcctgatggcctt
ggaataccagttgtacaaactgttcgcgaagcaaagtcgtacagcagtggtagtggagag
ctcagcgtccattcctccatcaagagcatgcccaggaagaggacgagggcccagaggctc
gactcttcatctgagtcagattgcagcggagagggattaccaactttgaatcaaattttc
ggaacatcagcccctccctctgctgtgacccaggatcagggagactccagtgaagctaac
agatgtgagggtgttacagctgatggggcagaaaggttgagccgtccgcctgcatgtccc
agccctgactgtgtcaattccagccaagcgtctgtggacttgtttggcacgccagaatgt
gatgtcccagtaaatgacattggcgtttccatggaatcatcacaattttcaagtgaagtc
cttgttacacagcaaaagatagaaatgcagaaggagctggtgaggttggagaagctgatg
gctctggtgtccgaggtgcttcatgagaaagaagaaagtcctgcaaaagaagtcccctca
aaaacaaaccagagcagtaaaaccacaggcccagacgctcacagacccctcccatgtgac
caggacacaggccaaggttcagaccagaaagctgttccagaagcagaacgagagcccagc
acaaggacatctgatggcaagggggtcacccagcccagtgtgtcaaagcatggcagcatt
gcagagatggcagtgcagcgctccacacgcatagcaaacagtgtaactggcaccggagcc
tccaagacacttaggtcaagttcagcagccaaaacattaaataacaatggttcaccatca
gatggacaagaagacaaagaaaataacaatcctccgagagagagaagtaaagctaagatg
gtgctagtgtcatctggattaagccccaatgaacagataatggtgaaaaagtttgccaag
cgagttggtgcctgtgtggtttcccaggtgacgccagaggtgacccatatcataatgcac
acagatgaacaactggtatgtgagcgcacgctgaagtacttccttggcattgcaggcagg
aagtgggtggtgagcttccagtggatttcagagtgcttcaaacaaaagaaactcttagat
gagaatctctttgaagtgagaggtgacgtggtgaatgggcccaatcaccagggccccatg
agagctcgtaccactgaagacaataacttgctcatgaagggttacaagatctgcttccag
gggccttttacagacatgactacagatgaaatggagtggatggtggagctctgtggagca
gttatagtcaaagatccacttcttttcaacagtaaacagaagtcccatcagctggtcatt
gtacagcctggatcagagtcgtcgtcatcgtccacatacagctgtctctctagacaagct
acagttgtgacacgtggttggctgttggatactgtggcaacctacactctccaaaacttc
aacaagtacacaacatga
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integrated database retrieval system
