Siniperca chuatsi (mandarin fish): 122867470
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Entry
122867470 CDS
T08948
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04140
Autophagy - animal
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122867470 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122867470 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122867470 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122867470 (plekhm1)
Membrane trafficking [BR:
schu04131
]
SNARE
SNARE associated proteins
Others
122867470 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
122867470 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Cytochrome_C7
Motif
Other DBs
NCBI-GeneID:
122867470
NCBI-ProteinID:
XP_044034233
LinkDB
All DBs
Position
LG20:complement(5667754..5681734)
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AA seq
1092 aa
AA seq
DB search
MLATQMPDSPPDAKYVKQIKEKLAQSLKALQKRYVMSDVQVTSEDGDANLLCCALEAIFI
HGIKSKYIRLEAGGRIRKGDRGPLPQPFFWSLLKTVTHRDVITELEKISFVGTDVGRCRA
WLRLALNHGLLECYLASLFREDSKLQAHYQPSALLLNTEEREVLLSYLQGLASLTFSLSY
KSAVLNEWTTTPLALAGLCPLSQADTLDLPLNGGDLPTSKPMYKESWDRVSQSSGSSDAL
DMPRGCAELLVGRGSSALQEGMTALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPTG
EQWSSCDLDMPINVNISTKRPNKNSLTEFRESGHCSQDSMREDSFVSSTGPDQYSETAIF
SGSDSETQGPITPSQDQPPNSVLSDSEPPPTSLELPSSDENHQMMNYSPSEECISTPSEL
HLDTLSTASEPVESVEPVEEIHTTGVQESTEPVQEEKEAETSEKSTSEPSVHQGVCRSTS
ILSRKLSTDSLSHSRSWISEDDIYKPHLEEVSDHDEVPPSYPTAELKVSQSPPSVVHRRQ
IGLSNPFRGLVKLGHLERRGAMGLWRDYYCELSPFEFRQYLNAEERTCYDNCSLVRCEDA
RITSPEGRFELAFPGKRLYLRAANRDEAEDWVDRIVEAVNKCRPASRVDEHWEVLQPTSE
NGVDERTVSSPSSGPSSPERGLSPSDSGTCGGQEVPPPLQEFDWSRSADLETDAIKEAVL
YVSTDPEARTWVPLVFSLSLEALKGFQVQEGRKLLWQTHPIEGIRDVVPDVSLGGPAFFK
LLTIRETLRLRAENPVEAHSWRVLIRGALDSYLESGEDGDSGEPVASLGVTGNLHRLVQH
RLKEDGALLVHLRTVPSEKGLDTQSFKCAGCPQQIGPSRGRAKLCEFSGQYYCDSCHHGD
TTIIPSRMVHNWDLTQREVSKKALQLLAQVEQEPLLNLEQLNPDLVKHAESMAQAHNLRQ
RLRLLGDYLLTCRSGACKKLQARMEQRTYLLESSHLYSVKDLRQIAEDEYGSYLNTLLQY
ASNHVFHCDLCTQRGFICQICHADDIIFPFQFDITTRCKDCKAVFHLACKAPGDYCPRCL
RMKKYLERDLQD
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctagctacacagatgccagattcgccacctgacgctaaatatgtcaaacagatcaaa
gagaagttggcccagtcgctcaaggccctgcagaagcgttatgtaatgtcagacgtacag
gtcaccagtgaagatggtgatgctaacctcctctgctgtgccctggaggccatattcatc
catggtattaagagcaagtacatccgcttggaggctgggggccggattaggaagggagac
cgaggacccctccctcagcctttcttctggagcctcctcaagactgtcactcaccgtgat
gtgatcacagagctggagaagatcagctttgtgggcacggacgtgggtcgctgccgagcg
tggctgcggctcgccctcaaccacggcctactggagtgctaccttgcatcgctgtttcgg
gaggattcgaagctgcaggcccattatcagcccagtgccttgctcctgaacactgaggaa
cgggaagttctgctcagctacctccagggtctggcgtcacttacattcagcctttcttac
aagtcggctgtcctcaacgaatggaccaccacgcccctggctctcgctggactctgcccc
ttgtcccaggcagacacactcgacctccctctcaatggcggagaccttcccacctccaag
cccatgtataaagaatcgtgggatagagtgtctcagtcgtcaggctcatcagatgcattg
gatatgccgagagggtgtgcagagttgctggtggggagagggtcaagtgcattacaagag
ggtatgactgcactcaactcatctaatttaagcctggacaccacaggctcctctcagctc
tcctccagcttgagctctgatagcctcctgcaggggcaggacccccgcagcccgacagga
gagcagtggtcttcatgtgacctggacatgcccattaatgtcaacatcagcaccaagagg
ccaaataaaaattctctgactgagtttcgggagagcggccactgcagtcaggactccatg
cgtgaagactcctttgtctccagcacgggtccagatcaatactcagagacggccattttc
agtggctctgacagcgagacccagggtcccattacaccatcccaagaccaacccccaaac
tctgtactgtctgattcagaaccaccaccaacatcccttgagctgccatcatctgatgag
aaccatcagatgatgaactactctccctctgaagagtgcattagtaccccttctgagtta
cacttggacacgctctctactgccagcgagcctgtggaatctgtggagcctgtagaggaa
atacatacgaccggagttcaggagagtactgagcctgtccaggaagagaaagaagccgag
acctcggagaagagcacctcagagccttcagtacatcaaggtgtctgtcgctctaccagc
atcctgagcaggaaattgtccacagattctctatcacattctcgttcctggatctccgag
gacgacatatacaagccccatttggaggaggtgtcggaccatgatgaggtgcctccttcc
tatcccacagccgagctcaaggtctctcagtcacctcccagtgtcgtccatcgcagacaa
atagggctgtccaacccgtttcgtggcttggtgaagctcggtcatctagagcgacgaggt
gcaatggggttgtggcgtgactattactgcgagctgtcaccctttgagttccgccagtat
ctcaatgcagaggagcggacgtgttatgacaactgctccctggtgcgatgtgaggacgct
cgcatcacctcgcctgagggccgctttgagttggcctttcctggaaagcgtctgtacctc
cgggcagccaatcgcgacgaagctgaggactgggtagaccggatagtagaggccgtcaac
aaatgccggccagcatctcgtgttgatgagcactgggaggtgctgcaacccaccagtgag
aatggtgtagatgaacgcacagtttcatccccgtcctctgggccctccagccctgagcga
ggtttatcaccctctgactcagggacatgcggagggcaggaggtacctcctcctctacag
gaatttgactggagtcggtctgctgatttggaaacagatgccatcaaagaagctgttttg
tacgtctccacagatcctgaggctcggacatgggtacctctggtcttctccctctccttg
gaggccttgaaaggctttcaggtacaagagggaaggaagttgctgtggcaaacccaccct
attgagggaatccgggatgtggtgcctgacgtctcattgggaggaccggcctttttcaaa
ctcctgaccataagggagacgcttagactcagggctgagaacccagtggaggctcactct
tggagggttttgatccgcggagctctggactcttacttggagagtggggaggatggggac
tctggggagcctgttgcatcgttgggggtgactggaaatctccacagactggtgcagcac
agactaaaagaagatggagcacttctagttcatctgcgcactgtgccctcagagaagggg
ctggacactcagagcttcaaatgtgcagggtgtcctcagcagattggcccgtcccggggg
agagccaagttatgtgagttctcaggccagtactactgtgactcctgtcatcacggtgac
accaccatcatcccttcacgtatggtgcacaactgggacctcacacaacgagaggtgtct
aagaaggccctgcagctgctggctcaggtagagcaggagcctctgttgaacctggagcag
ttgaaccctgacttggtgaagcatgctgagtccatggctcaggcccacaacctgcggcag
aggctacgcctgctgggcgactacctgctcacctgccgcagtggagcctgcaagaaactc
caagccagaatggagcagcgaacgtacctgttggagtcgagccatctgtacagtgtcaag
gacctacgacagatagcagaggacgaatacggaagctacctgaacacactgttgcagtat
gcctccaaccacgtgttccactgcgacctgtgcactcagcgtggctttatttgtcagata
tgccacgctgatgacatcatcttccccttccagtttgacatcaccaccaggtgtaaagat
tgtaaggctgtgtttcacctggcttgcaaggctcctggggactactgtcctcgctgtctg
cgaatgaagaaatacctggagagggatctgcaggactga
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