Siniperca chuatsi (mandarin fish): 122867492
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Entry
122867492 CDS
T08948
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00514
Other types of O-glycan biosynthesis
schu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122867492 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122867492 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
schu01003
]
122867492 (rfng)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
122867492 (rfng)
Glycosyltransferases [BR:
schu01003
]
Glycan extension
O-Glycan
122867492 (rfng)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
122867492
NCBI-ProteinID:
XP_044034273
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All DBs
Position
LG20:25350701..25392436
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AA seq
408 aa
AA seq
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MNPLHWPVRMHIASVGVSKFCFLFSLVFCGLLLLLIPALQPPARQVDLPQPRPQVRPTHA
SPSHHAGVPVVSVHVGELDSATGLNRSSAVPRGSIEADITRNDNHSHKKGMDSQGGALHG
GNGGRLSGSRSEDLLELKDIFIAVKTTRKYHKSRLELLIHTWVSQAKEQTYIFTDGEDKE
LLMRTGTDIINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLRLL
SSYHHSQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWAS
LGNFISTAEKIRLPDDCTIGYIIEALLEVTLTHTHLFHSHLENLQKLPTDTVLEQVTLSY
GGFENRRNVVSIVGGFSLAEDPTRFKTVHCLLYPHTDWCPKLKPRYKN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgctacattggccagtcaggatgcacatagcttcagtcggtgtcagcaagttc
tgcttcctgttttctctcgtattctgtggcctcctgcttctactcattcctgccctccag
cccccagcacgccaggtggatctgcctcagccccgaccccaagtcagacctacacacgca
agcccatcacaccatgctggggttccagttgtgtctgtccatgttggggaacttgactct
gccacaggactgaataggagctcagcagtaccgaggggatccatcgaggctgacataacc
aggaatgataaccatagtcacaagaagggcatggactcccaaggaggggctcttcatgga
ggaaatggtggtcgactctcagggtctaggtctgaggacctgttagagttaaaggacatt
tttattgcagtgaagactaccaggaagtaccacaagtccagactggagcttctgattcat
acatgggtttcccaagctaaagaacagacttacatattcactgacggtgaggacaaggag
ctgctgatgagaacaggaactgacatcatcaacactaactgctcagcagctcacacccga
caggctctgtgctgcaagatgtctgtggagtacgacaaattcatcgagtctcagaaaaag
tggttctgccatgtggatgacgacaactatgtgatcctccccagcctgctgcggctgctc
tcctcctaccaccacagccaggatgtgtacctgggccggcccagtctggatcatcctata
gaggctgcagagagggtcaagagtgacggatcggtgtctgtcaagttctggtttgctaca
ggtggggcaggtttctgtatcagcagaggtctggcactgaaaatgagtccatgggccagt
ttggggaatttcatcagcacagcagagaagatccgactaccagacgactgcaccatcggc
tacatcatcgaagcgctgctggaggtgaccctaacacatacacacctcttccattctcac
ctggagaacctacagaagctgcctactgacactgtgctggagcaggtgacgcttagctac
ggaggctttgagaacagaagaaatgtggtcagcattgttggaggcttttcactggctgag
gaccccacaaggtttaagacagtccactgccttctgtatccacatactgactggtgtcca
aaactcaaacctcgctacaaaaactga
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