Siniperca chuatsi (mandarin fish): 122867619
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Entry
122867619 CDS
T08948
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122867619 (scn4aa)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122867619 (scn4aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
IQ
Motif
Other DBs
NCBI-GeneID:
122867619
NCBI-ProteinID:
XP_044034562
LinkDB
All DBs
Position
LG20:complement(5703691..5729990)
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AA seq
1900 aa
AA seq
DB search
MATLLPPPGTDAFRRFTQESLAEIERLTEERKKAAEVEGHEEEEPTAPHADLEAGKSLPM
IYGDPPPELLNTPLEDLDPFYKAQKTFIVISKGNTIYRFNAEPACYILSPFSLVRRGAIK
ILIHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCVGSF
TFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVAALIQS
VKKMVDVMILTVFALAVFALVGLQLFMGNLRHKCVRWPIEINETAFEFFNTTTTFNDTVS
FNNTMGVNDTTYSNSTFNFTEYIENTENHYYLEGSLDALLCGNSSDAGKCPEGYTCMKAG
RNPNFGYTSFDSFGWAFLALFRLMTQDYWENLFQLILRAAGKTYMLFFVVIIFLGSFYLI
NLILAVVAMAYDEQNQATQREAIEKEEEFQRLLEQLKNQEQAQALGSRATLTSKKSLSHH
TISEFADDERSLEHDEIIKDCNGRLIPRLMIRSPTMVKSTADYELGEKSLSSEHSMLHLD
EPGLTQRSASAMTVLTAVLEELEDAQRPCPPGWYKFADMFLKWDCCVHWVVFKKWVHFVV
MDPFVDLAITICIVLNTLFMAMEHYPMTPEFDYMLSVGNLVFTGIFTAEMFFKLIAMDPY
YYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISLDCELPRWHMNDFFHSFLIVF
RILCGEWIETMWDCMEVAGAGMCLLVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDD
DGEMNNLQIAIGRITRGIDWFKAFIIRTVLHILGRKPEEPEEGPMDDEDPKTEGIEMNHL
DTSQNFIMADGISNCLVEGRPSGFIVDGEVSLNVPIAQGESDFENLGEDDEDDADIANDS
EISDERNNQHYLENFEDEISSPMLGNVKLMGALNDGDSSVCSTVDYQPPEPEPTEVEIEE
PDPVEPEACFTDNCVKRWPCLTVDITQGKGKKWWNLRRACFTIVEHDWFETFIIFMILLS
SGALAFEDIYIERRRTIKIILEFADKVFTYVFIIEMVLKWVAYGFKTYFTNAWCWLDFFI
VDISLISLVANWMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVL
LVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPMTEVNNRSDCMAIKEATQEARWVNV
KVNYDNVGQGYLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGS
FFTLNLFIGVIIDNFNQQKKKFGDKDIFMTEEQKKYYEAMKKLGSKKPQKPIPRPTNLIQ
GMVFDFISQQFFDIFIMVLICLNMVTMMVETDNQSAEKEDFLFKVNLAFIIVFTGECVLK
LFALRQYFFTNGWNIFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIK
GAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFNFETFG
GSIICLFEITTSAGWDGLLLPMLNKEYPDCDPDFENPGTGVKGNCGNPGMSMIFFCSYII
ISFLVVVNMYIAIILENFNVAQEESGDALCEEDFEMFNETWEKFDLDGTQFIEYSRLSDF
CDALQEPLRVAKPNLLRLIEMDLPLVIGDRIHCLDVLLAVTQMVLGDSVEMVAMRESIEA
KFILNNPTSDSFAPITTTVRHKEEQRAAVVIQRAYRNHLLKRCIRHAAFIHCCKRKGRKD
EGEDPPEKEGMLARRMGVLYGSNVDVAEEMEQAALETLASHQSPNSEILSHYTGAQCGPE
PLEPNIMVVPVEITNEVLLHSAPNQHFLTLLQANLRESIV
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgctccctcccccaggcaccgatgcgttccgccgcttcacccaggaatcg
ctggcggagatcgagaggctcacggaggaaagaaaaaaggccgcagaagtagagggccat
gaggaggaagagccaacggccccacacgctgatctggaggcgggcaagagtctgcccatg
atctacggagaccctccaccagagctgctcaacacacctctggaggacctggaccccttc
tacaaagcacagaaaacattcattgtgatcagcaaaggaaacacaatctacaggttcaat
gctgaaccggcttgctacattctgagcccctttagtctggttagaagaggagccatcaaa
attctcatacattcattatttagcatgttcatcatgattacaattctatcgaattgtgta
ttcatgacgatgagcaacccaccagcatggagtaaaactgttgagtatgtttttactggt
atctatacctttgaggcaacagtcaaagtgttgtctagaggtttctgtgttggatctttt
acattccttcgagatccatggaattggctggatttcatggtgatcagcatggcatacatc
actgagtttgttgaccttggcaatgtgtcagccctcaggacatttcgtgtacttcgagcc
cttaaaacaattactgtgattcctggtttgaaaaccatcgtggccgctttgatccagtca
gtgaagaaaatggtggacgtcatgattctgacggtctttgctcttgctgtttttgccctt
gttgggcttcaacttttcatgggaaatctgcgtcacaaatgtgtgcgatggcccatcgaa
ataaatgaaactgcatttgaattttttaacaccaccaccacatttaatgacacagtgtcc
ttcaataacaccatgggtgtaaatgacacaacatattccaacagtactttcaatttcact
gaatatattgaaaacacagagaatcactattatttggaaggcagtctggatgctcttctt
tgtggaaacagctctgatgctggaaagtgcccagaaggatacacatgcatgaaggctggg
aggaaccccaactttggctacaccagttttgattcttttggctgggccttcctggccctc
ttcagactcatgacccaggactactgggagaaccttttccagctgatcctgcgggcagct
ggtaagacatacatgctgttctttgtggtgattatctttctgggctccttctacctcatc
aacctcatcctggctgtggtagccatggcttatgatgaacagaatcaggcaactcagcga
gaggccatagagaaagaggaggagttccagcggctactagagcaactcaagaatcaggaa
caggctcaagctcttgggagccgagccactctaaccagtaagaagtcgctcagtcatcac
accatatctgagttcgcagatgatgaacggagccttgaacatgatgaaattatcaaggat
tgtaatgggagactcattccccgtctgatgatcagatcgcccaccatggtcaagtctact
gcagattatgaactcggagagaagtcattaagctctgagcacagcatgcttcatctggat
gaaccaggcctgacacagagatctgctagtgccatgactgtgctcactgctgtattggaa
gagttagaggatgctcagaggccgtgcccacctggctggtacaagtttgccgacatgttc
ctgaagtgggactgctgcgtgcactgggtggtctttaaaaagtgggtgcactttgtggtg
atggacccttttgttgacttggccatcaccatctgcattgtgctcaacaccctcttcatg
gccatggagcactaccccatgaccccagagtttgactacatgctctcagtggggaatctg
gttttcactggaatcttcacagcggaaatgttcttcaagcttatcgccatggatccctac
tactactttcaagttggctggaacattttcgacagcatcatcgtcactctcagtctggtg
gagttggggctggcaaatgtccaggggctgtctgtccttaggtccttccgtctgcttcgt
gttttcaaactagccaagtcctggcccacgctcaacatgctgatcaagattattggtaac
tcagtaggagctttaggaaacctgactttggtgctggccatcatcgtctttattttcgcc
gtggtgggtatgcagctctttggcaagagctataaggactgcgtgtgcaagatctcctta
gactgcgagctgccacgctggcacatgaatgacttcttccactcgttcctcatcgtgttc
cgcatcctgtgcggggagtggatcgagaccatgtgggactgcatggaggtggccggagct
gggatgtgtttacttgtcttcatgatggtcatggtcattggaaatctagtggtgttgaac
ctcttcctggccttgctgctcagctcattcagtggagacaacctctcagcaggggacgac
gacggagagatgaacaatctccagattgccattggcaggatcacacggggcattgactgg
ttcaaagcgttcatcattcgaacggtcctgcacattcttggcagaaagcccgaggaacct
gaggagggtccgatggacgacgaggaccctaaaacggagggaattgaaatgaatcacttg
gacaccagccagaatttcataatggcagatgggatatctaattgtttggttgaaggccgg
ccttctggatttattgtggatggagaggtcagcctcaatgtgccaatcgcccagggagag
tcagactttgaaaacctgggcgaggatgatgaggatgatgcagatattgctaatgactca
gagatttcagatgagagaaataaccaacattacttggaaaactttgaagatgaaattagt
agtcctatgctgggaaatgtcaaactgatgggtgctttgaatgatggggattcttcagtg
tgtagcacagtggactatcagccacctgagcctgaaccaacagaagtggaaattgaagag
ccagaccccgtggagccagaggcctgcttcactgacaactgtgtgaagcgctggccgtgt
ctgactgttgacatcacccaaggtaaaggcaagaaatggtggaacctccgtagggcttgc
ttcactattgtggagcatgactggtttgaaacctttataatctttatgatcctccttagc
agtggagctctggcctttgaagacatatacatagaaagacgccgaaccatcaaaattatt
ctggagtttgctgacaaagttttcacctacgtctttatcattgagatggtccttaaatgg
gtcgcatatggcttcaagacctacttcaccaacgcttggtgttggttagactttttcatt
gtagatatttccctgattagtttagttgccaactggatgggctactctgaccttggacca
atcaaatccctcagaactctcagggcactaaggcctctgcgagcactgtcaagattcgaa
gggatgagggtggtggtgaatgctcttgttggagcaattccctccatcttcaatgttctg
ctggtgtgtctgatcttctggctcatcttcagcatcatgggagttaacctgtttgctggg
aagttctaccgctgcatcaacaccaccacagaggagcttttccccatgactgaggtcaac
aacaggagcgactgcatggccatcaaagaagccacgcaggaggcccgctgggtcaacgtc
aaagtcaactatgacaacgtgggacaaggctacctgtccctacttcaagtggcaactttt
aaaggctggatggacatcatgtatgctgctgttgactcaagagaggtagaggagcaacct
tcttatgagatcaacctctatatgtacatatactttgtcatttttatcatctttggctct
ttcttcacactcaacctcttcattggtgtcattattgacaatttcaaccaacaaaagaaa
aagtttggagataaagacatcttcatgactgaggaacagaaaaagtactacgaggccatg
aagaaacttggttccaagaagccacagaagccaattccacgtccaactaacctaatccag
ggaatggtgtttgacttcatcagtcagcagttctttgacatcttcatcatggtgctcatc
tgcctcaatatggtgaccatgatggtggagacagacaaccaaagtgcagagaaggaagat
ttcctctttaaagtaaacttggctttcattattgttttcaccggagagtgtgtgttgaag
ctctttgccctgcgacaatacttcttcactaatggatggaacatttttgattttgttgtg
gtcatcttgtccatagctggtacaatgctctcagacataatcgagaagtactttgtgtca
ccaactctgttcagagtgatcagactggccagaataggcaggattctgcgtctcattaaa
ggagctaagggcattcggacacttctcttcgccctaatgatgtcacttcctgccctattc
aatattggtctcctgctcttcctcattatgttcatcttctccatatttggcatgtcaaac
tttgcctatgtcaaaaaggaggctggaatcgatgatatatttaattttgagacatttggt
ggtagcattatctgcttgtttgagattacaacatcagctggctgggatgggcttttactt
ccaatgctgaacaaggagtatccagactgtgatccagacttcgaaaacccaggcacaggt
gtaaagggtaactgtggcaacccgggcatgagcatgatcttcttttgcagctacatcatc
atctcattcttagtagtggtcaacatgtatatcgccatcatcttagagaacttcaatgtg
gcgcaggaggagagtggtgatgcactctgtgaggaagactttgagatgttcaatgagact
tgggagaagtttgacttagatggaactcagttcattgagtatagccgtctctcagatttt
tgtgatgccttgcaggagccattgcgggttgccaagcccaacctgcttcgcctgattgaa
atggacctgcccctggtcattggggacaggatccactgcctggatgtcttgttggccgtc
acacagatggtcttgggagactcggtggagatggtggcaatgcgggagagcattgaggct
aagttcatcctgaacaaccccacctcagactcctttgcaccgattaccacaacggtgcgc
cacaaagaagagcagagggctgctgtagtcattcagagggcttaccgcaaccacctactg
aaacgctgcatacgccacgccgcttttattcactgctgtaagaggaagggtagaaaggac
gaaggtgaagatccaccagaaaaagaagggatgctcgcacgaaggatgggagtgctatat
gggagcaatgtggacgttgcagaggagatggagcaggctgctttagaaactctagcaagc
catcagtctcctaattccgagatattatcacattacacaggggcccagtgtggtccagaa
ccccttgagccaaatatcatggttgtacctgtagaaattactaatgaggttttattacat
tctgcccccaaccaacacttcttgaccctactacaggcaaaccttagagagtcaattgta
taa
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