Siniperca chuatsi (mandarin fish): 122868140
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Entry
122868140 CDS
T08948
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122868140
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122868140
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF7557
Motif
Other DBs
NCBI-GeneID:
122868140
NCBI-ProteinID:
XP_044035759
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Position
LG20:complement(13837018..13854858)
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AA seq
1280 aa
AA seq
DB search
MKDSGGEGRGDEDKIGKSEKDQRWIPKIFKKRVCTTFVEDSFSNGALCQCGGTRDAHASV
ALGDYFSTAMVNHWDSAQHSSEYPTDAFGELEFAGASKRHSYFLRLSWDTPPSMVYTLIT
AHWGLSAPNLVVSVVGGEGRTKVKTWVREVIRQGLVKASQSTGAWILTTGLREGVGRCVG
EAVRDHAAAASSVSLNKVVALGIAPWGLVHKHQQLVNPQGSFPAKYYVQNMSRDSCCLDN
NYQAFLLVDDGSVGRRGGETGFRTKLEDYISHQRTGIWVHVMIRQSSGICWTKAIAGSGS
IDIPVLCMLVSGEASMLERVELSLKTSMPWLVLAGSGGLADFLSDVLENLSSASVVQSSS
EGDGEAGPSVDLKDRVAERVKKHFPSEAESDKLVERALSIYQNREFITIYHGEQEGPNDF
DTVLLKALVRASKQRVSADASPYNEELRLAVTWNRVDIAKTELFNGDIHWRYEDLEDSMT
DALINDKPKFVRLFTENGLNILDYLTYGRLESLFRSVADGTVLYQLLQRCLVERLGTAAS
VPKPSNLQDLPSKVPAENIQSGPMTEISLFEVAGVLELLMGDVCQPFFYDVLDLEQISSK
RRALRRASKLLRGDCLYREKRCLFPWASLFIWAVLQNRSEMATFFWEMAGESVLSALSGC
KILRELSKLEVETETKLSMKELAQRFENLAHDIFSSCYRSNESRSFTLLIRKSPVWGGTT
CLQMGMGADARLFFSHDGVQSLLSQIWWGDMKRNTEVWKLLLTFFCPVLCYTNLISFRKQ
EDNQQEEEEKPNEDGLGRDSDSLYGTTVFSFSDIKHIEADAQGSNSPWTANIKGIPHSRR
PPKRPFIVSRWRQFWFAPVTSFLGNVLMYFLFLLLFAYVLLVDFKPPPPSGPATSECVLY
FWVFTIVCEEFREAFFLETMTWRQRIRVYIQDVWNKCDLIAITLFLIGVICRMFEWSYGF
GRDILCGDYMVFTLRLIHIFAIHRQLGPKIIIVGKMMKDIFFFLFFLMVWLMAYGVANQA
LLYSYDPRLDRIFRRVFYRPYLHIFGQIPVEEMDVGKEWDMACTDNVTLIQGGAEPCRTL
NSNWLVVILLVVYLLVTNILLINLLIAMFSHTFSEVQANSDIYWKFQRYNLIVQYHFRPS
LAPPFIILSHINLFIKRNIRKVPSIKIRHFVLQLRGKVANRLMTWETIQKEDFLTAQNKI
QKSSDSERLKRMSVKMDGVVKHLTESRDFDHRLRALENEMEYCSNALSWIVETLAQGSTF
KPPRPPPTLRDSFASSSNSA
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactcaggaggagaaggaagaggcgacgaagacaaaatcggtaaatctgagaag
gaccagcgttggatccccaaaatcttcaagaaaagagtatgcaccacctttgtagaagat
tctttcagtaatggcgccctgtgccagtgtgggggtacaagagatgcccatgcctctgtg
gctctcggtgactatttcagcacagcgatggtcaaccactgggacagtgcccagcactcc
tctgaatatccgactgatgcctttggggagctagagtttgcaggagccagcaagaggcat
agctatttcctgcgtctgtcatgggacacacctccctctatggtctacaccctgataaca
gcccactggggtctttctgcgcccaacctggtggtttctgtagtgggtggagaaggcagg
acaaaggtgaaaacttgggtacgggaggtcatcaggcagggactggtgaaagcctcacaa
agcacaggagcgtggatcctgacaacaggcttgcgtgaaggcgttggcaggtgtgttgga
gaggcggtgagggaccatgccgctgcagcctcgtcggtctccctcaacaaggtggtggcg
ctgggcatcgctccctggggcctggtgcataaacaccagcagctggtcaacccacagggc
agttttcctgctaagtactatgtccagaacatgtctcgagactcctgctgcctggacaac
aactaccaagccttcctgctggtggacgacgggagtgtgggacgcagaggaggagagaca
gggttcaggaccaaactggaggactacatctcccaccagcgcacaggcatatgggtgcat
gtgatgataagacaatcctctggtatctgctggacgaaagccattgcaggcagcggcagc
attgacattcctgtcctttgtatgctggtatcaggggaagcaagcatgttagagagagtg
gagctttctctgaaaacctccatgccctggctggtgctggccggctcaggaggcttggct
gacttcttgagcgatgtcttggagaatctgtcatcagcctcggttgtccagtcttccagt
gagggagatggcgaggcaggtcccagtgtagatctgaaagacagagtggcagaacgggtt
aagaagcacttcccttctgaagcggagtcagacaaactagttgagcgtgctctgagcatc
taccagaacagagaatttattacaatctaccatggagagcaggagggcccaaatgacttt
gatacagtcctgctcaaagcgttggtgcgagctagtaagcagcgtgtgtcagctgatgcc
agcccttacaatgaagagctgaggctagcagtcacatggaacagggttgacattgccaag
actgaactcttcaatggagacatccactggaggtatgaagacttggaagactccatgaca
gatgccctgatcaatgacaagcctaagtttgtgcgtcttttcactgagaatggcctcaac
atcctggactatctaacttatggcaggctggaaagcctctttcgctcggtggctgatggg
acggtgctttaccagctacttcagcgttgtctagtggagcggctaggaactgcagcctct
gtgcccaaaccatcaaacctgcaggacttgccttccaaagtgccagcagagaacatacag
agtggcccaatgacagagatcagcctttttgaggttgcaggggtcctggaactgttaatg
ggtgacgtctgccagccatttttctatgatgttttggacttagaacagatctcatccaag
aggagagctcttaggcgtgccagtaagctgctgcgcggagactgcttgtatcgggagaag
cgttgcctcttcccctgggcttcgctcttcatctgggccgttctccagaaccgcagcgag
atggccactttcttctgggagatggcaggggagtcggtgctgagtgctctgagtggctgt
aagatactgagggaactttccaagctggaggttgagactgagaccaaactgtctatgaaa
gagctggctcagaggtttgagaacctggcacatgacatcttcagctcttgctatcggagc
aatgagagccgctctttcaccctgctgattaggaaatctccagtttggggtggtaccacc
tgcctccagatgggcatgggcgccgacgcacgacttttcttcagccatgatggagtacag
tctctgttgtcccagatctggtggggtgacatgaagaggaacacagaggtgtggaagctc
ctgctcaccttcttctgccccgtcctctgctacaccaacctcatctccttcaggaaacag
gaggacaatcagcaagaggaggaggagaagcctaatgaggacgggctgggcagggacagc
gacagcctctatggcaccaccgtcttctctttctcggacatcaagcacattgaagctgat
gcacaaggatcaaacagtccctggacagcaaacatcaaaggcataccccactctcgcaga
ccaccaaagcgtccgttcatagtgtcaagatggcgtcagttctggtttgcacctgtcacc
tcatttttgggcaacgtcctgatgtacttcctcttcctcctgctgtttgcctatgtgctg
ttggtggacttcaagcccccgccgccctctggtccagccacttctgagtgtgtgctgtac
ttctgggtattcaccattgtgtgcgaggagttccgggaggcgttctttttggagacgatg
acttggcgtcagaggatcagagtgtatattcaggatgtgtggaacaagtgtgacctcatt
gccatcacactgttcctcataggagtaatctgcaggatgttcgagtggtcatatgggttt
ggccgggatatcctgtgtggggactacatggtcttcaccctccgtctcattcacatcttt
gccattcatagacagctgggaccaaaaatcatcattgttggcaagatgatgaaggatatc
ttcttcttccttttcttcctgatggtgtggctcatggcatatggagtagccaatcaggct
ttgctttactcatacgaccctcgccttgatcgcatctttcgccgtgttttctacaggccg
tacttgcacatctttggacagatccctgtggaggagatggatgtggggaaggagtgggac
atggcctgcacagacaatgtgacattgattcagggtggagcggagccgtgcagaactctg
aatagtaactggctggtggtaattctgctggttgtttatctgctggtcaccaacatcctg
ctcatcaacctgctcatcgccatgtttagccacaccttctctgaagtgcaggctaacagt
gacatctactggaagttccagcgctacaacctgattgttcagtatcacttccgtccttcc
ctggctcctccttttatcatcctctcgcacatcaatctctttatcaagaggaacatccgc
aaggtgccctctatcaagatccgccactttgtattgcagttaagagggaaggtagctaac
agactaatgacgtgggaaaccattcagaaggaggacttcctgactgcccagaacaagatc
cagaaaagtagtgattcagagaggctcaaacggatgtctgtcaaaatggatggtgtggtt
aaacatctgactgaaagcagagactttgaccacaggctgagggctctggagaatgagatg
gagtattgctcaaatgctctcagctggattgtggagactttggcacaaggcagcaccttc
aaacctcctcggcctccacctacattaagagattcgtttgcctcttcttccaattctgcc
tga
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