Siniperca chuatsi (mandarin fish): 122868978
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Entry
122868978 CDS
T08948
Symbol
trpm4a
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122868978 (trpm4a)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122868978 (trpm4a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Sec6
Motif
Other DBs
NCBI-GeneID:
122868978
NCBI-ProteinID:
XP_044037405
LinkDB
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Position
LG21:25191374..25251428
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AA seq
1332 aa
AA seq
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MLVFYLPLSPLLSVGTAAETRACWLWAGRSGGCRRSCSAARLTRTSAHTSQLLQLRRMKE
LKKERGVGAGKAGSNKEKDQSWIPKIIKKRVCTTFVEDSSSNGALCQCGAVREVHDSVTT
GDYFGAAIVTQWDSIQHSSECPTDAFGELEFAGAGRRHSHFLRLSCDTSPQIVYNLMTTH
WGLPPPNLVVSVVGGKGHEKIKTWVRDVLRNGLVRAAQSTGAWILTGGLMEGVARCVGEA
VRDHAAAAPALSKKKVIAVGLAPWGLVHNRQQLVNAQGSFPARYYVQNTSSNFCCLDNNC
QAFLLVDDGSVGRRGGETAFQASLEDYISHQRTGIWGSGSIEIPVLCMLISGDANMLKRL
DASLKKATPWLVLAGSGPAADLISELLGNLSSVSLSATSPPAEGKAGVGLSTEPRDRVRD
KVRRHFPAEAELEKLVDSALSISKNRELITVFHGEQEGSDDFDTVLLKALVRASKHVSSE
ACEYTEDLKLAVAWNRVDIAKTELFNGDIQWKYEDLEDAMTDALINDKPQFVRLFCENGL
NILNYLTYGRLESLYCSLSDSSLAYILLQKRLSERQGLVGSLPNLDGAVTEKRRPLKSPL
GALTGPASAMELTLFEKLVPVVRDLIKVSRLLWDLLGDVCQPFYYGPLGLDQSTSTRRAL
KQVNKMLLGKCVYRDQCCLSPWAALFIWAVLQNRSQMAVYFWEMAGESVLSALAGCKMLR
ELSKLESETENKLAMKELAQTFEKLAHDVFGECYQNSESRSFTLLIKKSLVWGGATCLQM
ATAADARLFFSQDGVQSLLSQIWWGDMERSTEVWKLVLTFFLPPLLYTDLISFREQEEEV
KSVKVHHARDTDSLDGNDATVFSLADIIQNEEESEEFRPLKKNLKDSLPSNSKRPFVVTR
WRQFWFAPVTSFLGNVLMYFLFLCLFAYILLVDFKPPPPDGPATLEFVLYFWVFTLVCEE
IRQTFFVGSTFVLQSMRNYIQDVWNKCDLTAIALFTLALCCRMCPWSYEFGRAVMAIDFM
VFTLRLIHIFAIHKQLGPKIIIVGKMMKDVFFFLFFLAVWLMAYGVANQALLYSYDPRPN
WIFRRVFYRPFMHIFGQIPIHEMDADKLVEVNCTNDATRIEAGEEPCLNTFANWLVVILL
IIYLLFTNIILVNLLIAIFSYTFSKVQERSDTYWKFQRYNLIVEYHSRPCLAPPFIIISH
LHLFIKRYIRRIPSVKSKHFVLELQGRKASHLNTWEAIQKENLLSAQNKWQRESDTARLK
RTSVKVDSVLKQMAEICDHDRKLRLMETELEYCCSALSWMTDALSQSNLIKAGQPPPSAP
QRPDSTVSKLTA
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcttttacttgcctctgtccccactgctctcagtagggacagcggcagagact
agggcctgctggctgtgggctgggcgtagtggaggctgtaggcggagctgcagcgcagca
cggctgacccggacctctgctcacacttcacagctgctgcaactgcgcaggatgaaggag
ctgaagaaagagaggggcgttggagccggaaaagctggaagtaataaagagaaggaccag
agctggattcccaagatcatcaagaagcgagtgtgcaccacttttgttgaagattcttcc
agtaatggagcgttgtgtcagtgtggtgctgtgcgggaggtgcatgactctgtgacaaca
ggggactactttggagcagctattgtcacccagtgggacagcatccagcactcttcagag
tgtcccaccgacgcctttggagagctggagtttgccggcgctggacgcagacatagccat
tttctgcggctgtcatgtgacacatcacctcagatcgtctacaatctgatgacgactcac
tggggcctgcccccacccaacttggtggtgtcggtggtagggggcaaaggccatgagaag
attaagacatgggtgagagatgtcctgagaaacgggctggttagggctgcacagagcaca
ggggcctggatcttgacggggggtctgatggagggtgtggcccgctgtgtgggcgaggcg
gtgagggaccacgcggccgcggctccagctctttccaagaagaaagtgattgctgtggga
ctggcaccctggggcctggtgcacaacaggcagcagcttgtcaatgcccaggggagtttc
cctgctcgttactacgtccagaacacatcgagcaacttctgctgcctggacaacaactgc
caggcgttcctcctggtggatgatgggagtgttggccgccgagggggagagacagccttt
caagctagtctggaggactacatttcccatcagcgcactggcatttggggtagtggcagt
attgaaatcccagtgctgtgcatgctcatctcaggagacgccaatatgctgaagagatta
gatgcctctctgaagaaagctacgccctggctggttcttgctggttctggtccagctgca
gatcttatcagtgagctgctgggcaatctctcctctgtttccctcagtgccacctctccc
ccagcagagggcaaggctggtgtgggtctcagcacagagccccgcgacagggtccgtgac
aaggtccggagacacttcccagctgaagctgagctggagaaactggtggatagtgctctg
agtatttctaagaacagagagctcatcactgtttttcacggggaacaggagggttctgat
gattttgatacagttctcctcaaagcccttgttagagctagtaaacatgtgtccagtgag
gcctgtgagtacactgaagatctgaaactggccgtggcttggaaccgggtggacatcgcc
aaaactgagcttttcaatggagacatacagtggaagtatgaggatcttgaagacgccatg
acagatgcactgatcaacgacaagccccagtttgtgcgtctgttctgtgagaatggtctg
aatatcctgaactacctgacatacggccgcttggaaagcttgtactgctcgctgtcagac
agctcactggcctacattctgctccagaagcgtctgagcgagaggcagggcctggttggt
tcgctgcccaacctggatggagctgtgacagagaagaggagacctctgaagagtcccctg
ggtgcactaactggacctgcctcagcaatggagctcaccctgtttgagaagctggtgcca
gttgttcgtgacttaatcaaggtatcccgcctgctgtgggacctgttgggtgatgtctgt
cagcctttctactatggacctctgggccttgaccagagcaccagcaccaggagggctctc
aagcaagtcaataagatgctgttggggaagtgtgtgtacagggaccagtgctgcctctca
ccctgggcagcactcttcatctgggccgtcctgcagaaccgtagtcaaatggctgtttac
ttctgggagatggcaggggagtcagtgctgagcgctctggctggctgtaagatgctgagg
gagctttctaagctcgagagtgagactgagaacaagctggccatgaaggaactagcacag
acgtttgagaaactggcacacgatgttttcggtgagtgttaccagaacagcgagagtcgc
tcctttactctcctaataaagaagtctttggtgtggggcggggctacgtgcctgcagatg
gccaccgcagctgatgcccgcctattcttcagccaagatggtgttcagtctctgctgtct
cagatctggtggggtgacatggagaggagtactgaggtctggaaactggttctcaccttc
ttcctgccccccctcctctacacagaccttatcagcttcagggaacaagaggaggaggtt
aagtctgtgaaggtccaccatgccagagacactgacagtctggatgggaatgatgccact
gtcttctcccttgctgacattatacaaaatgaggaagaatctgaagagttcaggcctcta
aaaaagaacctgaaagactctttgccatccaactccaagagaccatttgttgtgacacgg
tggagacagttctggtttgcccctgtcacatcattcctgggcaatgtgctgatgtacttc
ctcttcctctgcctgtttgcctatattctgttggtggacttcaagcctccaccccctgac
ggccctgccacgctggaattcgtgctttacttttgggttttcaccttagtatgtgaagag
attcggcagacgttctttgtgggcagtacctttgtgctccagagtatgagaaactacatc
caggatgtgtggaacaagtgtgacctcacagccatcgctctcttcactttggctctgtgc
tgcagaatgtgtccctggtcatatgagtttggccgagctgtgatggccatagattttatg
gtcttcacactacgtctgatccatatctttgccatccacaaacagcttgggccaaagata
ataattgttggcaaaatgatgaaggatgttttcttcttcctttttttcctggctgtgtgg
ctcatggcctatggggtggccaatcaggcactcctctactcgtatgatccccgccctaat
tggatattccgcagagtgttctacagaccattcatgcacatttttggacaaatacccata
catgaaatggatgctgataaattggtggaagtaaactgtacaaatgacgccacacgaatt
gaagctggcgaggagccctgcctgaacaccttcgccaactggctggttgtcatcctcctt
atcatctacctgctgttcaccaacataatactggtcaacctactcattgctattttcagc
tacaccttctccaaagtacaggagcgcagtgacacctactggaagtttcagcgttacaac
ctgattgtggagtaccactcaaggccctgcctggcaccacccttcattatcatctcacac
ctccaccttttcatcaagagatacatccgccgcatcccctcagtcaagagcaaacacttt
gttctggagctgcagggcagaaaggccagccacctcaacacatgggaggctatacagaaa
gaaaacctcctctcagctcagaataagtggcagagggagagtgacacagcacgacttaaa
cgtacatctgtcaaggtggacagcgtgcttaagcagatggcagagatctgtgaccatgac
cgaaagttgcggctgatggagacagagctggagtactgctgcagcgccctctcctggatg
acggatgctctgtctcagagtaatctgataaaggccggccagccgccaccctccgctcct
cagagacctgactccactgtctcaaagttgactgcctga
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