Siniperca chuatsi (mandarin fish): 122869208
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Entry
122869208 CDS
T08948
Symbol
scn4ab
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122869208 (scn4ab)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122869208 (scn4ab)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
122869208
NCBI-ProteinID:
XP_044037891
LinkDB
All DBs
Position
LG21:18032..53393
Genome browser
AA seq
1815 aa
AA seq
DB search
MMSRKMSFLGFWRSSKERGALLKRANQLRLLPSQLRLLLGDGGVRANLHDARMAPLLPPV
GSEIFRRFTPASLEEIQRRYEVEEKERQRRKEKNIEIAEEDLPKPASDLEAGKPLPFIYG
DPPPELLNTPLEELDPFYQSQKTFIVLGKGNVIYRFNAEPSCYLLSPFNPLRTIAIKILI
HSLFSLFIMVTILTNCAFMTMSDPPAWSKTVEYLFTFIYTFEATIKVLSRGFCVGGFTFL
KDPWNWLDFMVISMAYLTEFVDLGNVSVLRTFRVLRALKTITVIPGLKTIVGALIQSVKK
LADVMILTVFCLSVFALIGLQLFMGNLRQKCVLIPPLLLRNHTSDIDLNTGYHDNDTHAN
NTGSSDFDFYEYVNKPENYYYLPGQLDALLCGNSSDAGVCPEGYICLKVGRNPNYGYTSY
DSFGWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMA
YAEQNEATMAEAKQKEEEYAQILEALKKREEEQAACRAAHSENSQEQDHTAMEDFEDDQR
PCPPCWYAFADIFLKWNCCGCWRWLKQYLYTIVMDPFVDLGITICIVLNTVFMAMEHYPM
TEEFEELLSVGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGLANV
QGLSVLRSFRLMRVFKLAKSWPTLSMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKNYKDCICRISFDCELPRWHMYDFFHAFLIIFRVLCGEWIETMWDCMEVSGQTMCLIIF
MMVLVIGNLVVLNLFLALLLSSFSGDNLAAPEDEGENNLQIAMNRINRAVAWTKTWILEH
MWTLMGKKNHVNPDHTEVDNEEDDRTTKEFLALTFLTSDQPASQVKSLGCNHGNMTSIYH
NIASLRVPIAEAESDFETPDNDIDDEDEEHEEEEDEEKHSQCNESSVCSTVQKLPEVQEA
EDDVRDKNTPEDCWSDKCYQRCPFLDIDTSQGRGKVWSNFRRTCFSIVEHNYFETFIIFM
ILLSSGALAFEDIYLEQRQVIKTVLEYADQVFTYVFVVEMVLKWVAYGFKTYFTNAWCWL
DFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSI
FNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEEMFLPKEVNNKTECFALMEANFTEV
RWKNIKVNFDNVGTGYLSLLQVATFKGWMDIMYAAVDSRDVESQPVYEANLYMYLYFVCF
IIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKKPQKPVPRP
ENKFQGLVFDLVTKQFFDIFIMVLICLNMVTMMVETDEQSVEKDFILYWVNFVFIVIFTT
ECTLKIIALRQHYFAVGWNIFDFVVVILSVVGLLLADIIEKYFVSPTLFRVIRLARIGRI
LRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAMIDDMFN
FETFGNSMICLFMITTSAGWDGLLNPIMNTPPDCDPNIENPGTTVRGNCGTPGLGIIXFT
TYIIMSFLVVVNMYIAIILENFNVATEESTDPLCEDDFEMFYETWEKFDPDASQFIQYSK
LSDFCDTLKDPLRISKPNTIKLIHMDLPLVPGDKIHCLDILLALTAQVLGDSGEMDALKA
SMEEKFMANNPSKVSYEPISSTLRRKQEEVAVTVIQRAYRKHLLQRTVKLASYKYREKTE
GRRDKDLPPETEGLLCKRISQLYGDGKETEENVSGVSGEDPPARVELQSEFLLHAAPPLN
APDFLRDDNLRESVV
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagaaaaatgtcatttttggggttttggagaagcagcaaggagagaggagct
cttctgaagagagctaatcagttgagacttcttccttcacagctaagactgttgttaggt
gacggtggagttcgagcaaacctgcatgatgcaaggatggcacctctgctgccccctgtt
ggttcagagatcttcagacgcttcactcctgcttcgctggaggaaatccaacgacgatat
gaagtggaggagaaggagcgacagaggaggaaagagaagaacatagagattgcagaggaa
gatcttcctaaaccagccagtgacctggaggctgggaagcccctcccattcatctacgga
gacccgccccctgagcttctcaacaccccattggaagagctggatcccttctaccaatca
cagaagacgttcatcgtgcttggtaaaggaaacgtcatctatagatttaacgctgagcca
tcttgttacctgctgagtccgttcaacccgctgaggactatcgccatcaagatcctcatt
cactctttattcagtttgttcatcatggtgacaattctgaccaactgtgcattcatgacg
atgagtgatcctccagcatggagcaagactgtggaatatctgtttacattcatctacacg
tttgaagcaacgatcaaagttctgtccagaggattctgtgtcggaggtttcaccttcctc
aaagacccctggaactggctcgacttcatggtcatcagcatggcatacctgacagaattt
gtagatttgggaaatgtttctgtgttgaggacattcagagttcttcgagctctgaaaacc
atcacagtcatccctggtctgaagacaattgtcggagcactcatccaatctgtgaagaag
ctagctgatgtcatgatcctgacggtgttctgcctcagtgtcttcgctctaattggtctg
cagctcttcatgggaaacctgcggcaaaaatgtgtcctcataccaccgctgttgcttaga
aaccacacgtctgacatcgacctaaatactggttaccatgacaatgacacccacgccaac
aatacaggaagcagtgactttgatttctacgaatatgtcaacaagccagagaactactac
tacctgcctggtcagcttgatgctctgctgtgtggaaacagttctgatgccggggtctgt
ccggagggttacatctgtctgaaggtggggagaaacccaaactacggctacaccagctat
gactcgtttggttgggcgttcctgtctctgtttagactgatgacccaggactactgggaa
aacctctttcagctgacgctgcgagcagcaggtaaaacctacatgatcttctttgtggtc
gtcatcttcctcggctcgttctacctcattaacctcattctggccgtggttgccatggcg
tatgccgagcaaaacgaggccacaatggctgaggccaaacagaaggaggaagagtatgct
cagatcttggaggcgctgaagaagagagaggaggagcaggcggcctgcagggctgcacac
tcagagaacagccaggagcaagaccacactgccatggaagactttgaggacgaccagaga
ccgtgtcctccatgttggtatgccttcgctgacatctttcttaagtggaactgctgtggc
tgttggcggtggctcaaacagtatctctacaccatcgtcatggacccgttcgtcgacctt
ggcatcaccatctgcatcgtcctcaacacagttttcatggccatggagcattatccaatg
acagaggagttcgaggagcttctgagtgtcggaaatctggtcttcacagggatcttcaca
gctgagatggtcctcaaacttctggccatggacccgtactactacttccaggtgggctgg
aacatctttgacagcatcatcgtcaccatgagtctggtggagctgggattagctaacgtt
cagggcttgtctgtgctgcgctccttccgattgatgcgagtgtttaaactggccaagtca
tggccgaccctcagcatgttgataaaaatcattgggaactcggtgggggctctgggtaac
ctaactctggttctggccatcatcgtcttcatcttcgcagtcgtcggcatgcagctgttc
gggaagaattacaaagactgcatctgtcgcatctcattcgactgtgaacttccgcgctgg
cacatgtacgacttcttccacgccttcctcatcatcttcagggtcttgtgtggcgagtgg
attgagactatgtgggactgcatggaggtctcaggtcagaccatgtgtctgattatcttc
atgatggttctcgtcattggaaacctggtggtcttgaatctctttctggccttgttgctg
agctcgttcagtggggataatcttgcggcaccagaagatgaaggagaaaacaacttgcag
attgccatgaaccggatcaatagggctgtggcctggacaaagacctggatcctggaacat
atgtggactttaatgggaaagaagaaccacgtcaacccagaccacaccgaggtcgacaat
gaggaagacgataggacgacaaaggagtttttggctttgacctttttgacctcggaccag
ccggcgtcacaggtcaagtctctcggctgtaaccatggcaacatgaccagcatctaccac
aacattgcctccctgagggtccccatcgcagaggccgaatcagacttcgagacgcctgac
aatgatatagacgatgaggatgaagagcatgaagaagaagaggatgaagaaaaacactcc
caatgtaacgagtcgtcggtctgcagcactgtgcagaaactccctgaagtccaggaggct
gaagacgacgttcgtgataaaaatacacctgaggactgctggagtgacaagtgctaccaa
cgctgtccattcctggacatagacacgtcccaaggcagagggaaggtctggtctaacttc
aggagaacctgtttctctatcgtagaacacaactactttgagaccttcatcattttcatg
atcctgctgagcagtggagctctggcatttgaggacatctacctggagcaacgtcaggtc
ataaagacggttctggaatacgcagaccaggtgttcacctatgtgttcgtggtggagatg
gttctcaagtgggtcgcctacggattcaagacttacttcaccaacgcctggtgctggctc
gacttcctcatcgtagacgtgtctctggtgtctctgacagcaaacatcctgggatactct
gagttgggggccatcaagtctctgaggactctgagagctctgaggcccctgagggccctc
tctcgcttcgagggcatgagggtggttgtgaatgccctggttggagctatcccgtccatc
tttaacgtgctgctggtgtgtctgatcttctggctgatcttcagcatcatgggagtgaat
ctgtttgcagggaagttttattactgttttaacgagacgtctgaggaaatgtttcttcct
aaagaggtcaacaacaagactgagtgtttcgctctgatggaggctaacttcactgaggtc
cgctggaagaacattaaggtcaactttgacaacgtaggaactggctacctgtcgctgctg
caagtggccacatttaaaggctggatggacatcatgtatgcagcggtggactccagagac
gtggagtcccagccagtgtatgaggccaatctgtacatgtacctttactttgtctgcttc
atcatcttcggctccttcttcaccctcaacctcttcatcggagtcattatcgacaacttc
aaccagcagaaagccaagttgggaggaacagatattttcatgacagaggaacagaagaaa
tattacaatgcaatgaagaaactgggctccaagaaacctcagaaacctgttccacgacct
gagaataagttccagggtctggtctttgacctcgtgaccaaacagttttttgacatcttc
atcatggtgttgatctgcctcaacatggtgaccatgatggtggagacggacgagcagagc
gtggagaaagacttcatcctgtactgggtcaactttgtcttcatcgtcatcttcaccaca
gagtgcactctgaagatcattgcactccggcagcactactttgctgttggctggaacatc
ttcgacttcgtggtcgtcatcctgtccgtcgtaggcctcctccttgctgacatcatagag
aaatattttgtctcgcccacgctcttccgtgtgatccgattggctcgtatcggccgaatt
cttcgtctcattcgtggagccaaggggatccggacacttctgttcgccctgatgatgtct
cttcctgccctcttcaacattggtctcctcctcttcctcatcatgttcattttctccatc
tttggcatgtctaactttgcctatgtgaagaaggaggctatgatcgacgacatgtttaac
tttgagacatttgggaacagcatgatctgtttgtttatgatcaccacatcagctggatgg
gatggtctgctgaatcccatcatgaacacaccgccggactgtgaccccaacatagagaac
ccaggaacgacggttagagggaactgtggtaccccagggttgggcatcatcnttttcacc
acctacatcatcatgtccttcttggtggtggtcaacatgtacatcgccatcatcctggag
aactttaacgtggcaacggaggagagcactgacccgctgtgtgaggacgactttgagatg
ttttatgaaacctgggagaagttcgaccccgacgcttcacagtttatacagtacagcaag
ctgtcagatttctgcgacactctgaaggatcctctgaggatttccaaaccaaacactatc
aaactgatccacatggatctgcctctggttcctggagacaagatccactgtctggacatc
ctgctcgcactcactgcacaggttttgggtgattcaggagagatggacgctctcaaagcc
agcatggaggagaagttcatggccaacaacccctccaaggtgtcgtatgaaccaatcagc
agcactctgcggaggaaacaggaagaggtggcagtgacggtgatccagagagcgtacagg
aaacacctcctgcagcggacggtaaaactggcgtcctacaaatacagagagaagacggag
ggacgtcgagacaaggatttaccaccagagacagaaggacttctctgtaaacgaatcagt
cagctttacggagacggcaaggaaacagaggagaatgtctcaggtgtttcaggtgaggat
ccccctgcccgggtggagcttcagagcgagtttctcctccatgctgctcctcctctcaac
gcccctgacttcctgcgagatgacaacctgagggagtctgttgtctga
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