Siniperca chuatsi (mandarin fish): 122869718
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Entry
122869718 CDS
T08948
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122869718 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122869718 (trpc5a)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122869718 (trpc5a)
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122869718 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
122869718
NCBI-ProteinID:
XP_044038883
LinkDB
All DBs
Position
LG22:complement(20358382..20504908)
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AA seq
1092 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPFFSLIYLLAPKSAL
GSFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEHNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFIGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSIWYLLMWLHNKLCRRGQPPGEDTHKCENLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETARDDGAMASEDDSESGDGCGGGGQRSKGVTFMTPLEDEVGPTPTLGVSALVRSISGM
TQIERGGEGEEGELEEGIGWGEEEEEEEGKPKSNGLKTTVIPPSSTTVLPSPSSSFSLSF
SSSFARTRSRMQRLSAPSAKTDSFKRLSYLFSRSKRKAPPMPLPLQSPPSYTISDGLLRP
LGSHSHSDFRLSDVTRSETHLNEVGRSVDINNPSFSPRRTNGRDSLLTLPLPPPCPCQSL
HCASNMSESSSRLLDSSEDVFQGGGVGGAGERGVDGGGGRGGVLMMGGWVGPCDDVIEDS
CEVIEDSVTTQL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacatactcgccgtaccgcgaccgc
atcccgcttcagatcgtccgggctgaggtggagctgtctgctgaggagagggcctacctc
accgctgtggagaaaggtgactatgcgggtgtcaaacatgccctccgcgaggcggaggtc
tactacaacatggatgtgaactgtctggacccgctgggccgcagcgcgctcctcattgcc
atcgagaatgagaacctggagatcatggagctcctgcttgaccatggcatccacaccggc
gacgccctgctctacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
cacaggaggcctagcggcgagaaacaggttccctcactgatgatggacagtcagttttca
gagttcaccccagacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctcctcgtccagcggaaggtcaccattcccagaccgcaccagatacgatgtgac
tgtgttgagtgtgtatccagttcagaggtcgacagtcttcggcattcacggtctcgactc
aacatctacaaggctctggcctcgccctccctcatcgcactgtctagtgaagatcccatc
ctcactgccttcagactgggctgggaactcaaagagctcagcaaggtggagaatgagttt
cgtcaggagtacgaggagctgtcgcagcagtgcaaacggttcgccaaagaccttctggac
caggccaggagttccagagagctggaaaccatcctgaaccacagagacaacgaccagagc
gaggaactggaccccagacagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtggcccaaccgaactgccagcagctgctggccacgctgtggtac
gacggcttcccgggctggaggagacgacactgggcggtcaaactggtcacgtgcttcatc
atcggactcctgtttcctttcttctcactgatctacctgttggctcctaagagcgctctg
ggaagcttcatcaagaagcccttcatcaagtttatctgccacacagcgtcctacctgacc
ttcctcttcctcctgctgctggcctcgcagcacatcgcccgcaccaacctgcacatgcag
ggacctccacccaccatcgtcgagtggatgattctcccatgggtgctgggcttcatctgg
gcagagattaaggagatgtgggacgggggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactccctctacctggccaccatatcactgaagatagtggcc
tacgttaagtataactcctcccgtcccagggaggagtgggagatgtggcaccccacgctc
atagccgaggctctgttcgccatcgccaacatcttcagctccctcagactcatctccctc
ttcactgccaactcccacctcgggcccctgcagatctcactggggaggatgctgctggac
atcctcaagtttctcttcatttactgtctggtcctgctggcgtttgctaatggtctgaac
cagctgtatttctactatgagacaaaggcctcagaggaacacaacaactgcaagggcatc
cgctgtgagaggcagaacaacgccttctcaacgttatttgaaactcttcagtctctgttc
tggtcgatattcgggctgttaaacctgtacgtcaccaacgtgaaggcccggcacgagttc
acagagttcattggggcgaccatgttcgggacgtacaacgtcatctcgctggtggttctg
ctcaacatgctcatcgccatgatgaacaactcctaccagctcatcgctgaccacgccgac
atcgagtggaagtttgcccgcaccaagctgtggatgagttactttgacgagggcggcacg
ctgccgcctccgttcaacatcatccccagccccaagtccatctggtacctgctcatgtgg
ctccacaacaagctgtgcaggagaggccagccgcccggggaggacacgcacaaatgtgaa
aacctccgagagttcacggaacgccacgctgacagtctgatacagaatcagcattaccag
gaagtgatccggagcctggtgaagaggtacgtggcggccatgatacgcagcgccaagacg
gacgagggactgacggaggagaactttaaggagctgaagcaagacatctccagtttccgc
tacgaggtcctggatctcctcggcaaccggcgtcctccccggcgacattactcctcttcc
agcgagacagcgagagacgatggcgccatggcctcggaggatgacagcgaatcgggtgat
ggctgtggaggtggtggccagaggtcaaagggcgtgaccttcatgaccccgctggaggac
gaagtggggccgacaccgacgcttggcgtgtccgccttggtgcgctccatttctggaatg
acccagatagaaagagggggagagggggaggagggggagctggaggagggcattggatgg
ggggaagaggaggaggaagaggaggggaaaccaaagagcaacgggctgaagacaaccgtc
atccctccgtcctccaccaccgtcctcccctccccgtcttcatcattctccttgtcgttc
tcctcatcattcgctcgtacgaggagccgcatgcagcgcctctcagctccgagcgcaaag
acagactctttcaagcgcctctcctacctgttctcacgctccaaacgcaaagccccaccc
atgcctctccccctccagtccccgccctcctacaccatctccgacgggttgctccgcccc
ctggggagccacagccactccgacttcagactcagtgacgtgaccagaagcgagactcac
ctgaacgaggtgggccgctcagtcgacatcaataacccctcgttctccccgcggagaacg
aacgggcgggactcgctcctgacgctgcccctcccgcccccgtgcccctgccaatccctg
cactgtgcttccaacatgtccgagtccagctcgcgcctcctggactccagcgaggacgtt
ttccagggcggaggcgtgggaggagcgggcgagcgtggcgtggatggaggagggggaaga
ggaggggtgctgatgatgggcgggtgggtgggaccctgcgacgatgtcatagaggacagc
tgtgaggtcatagaggactctgtcaccacacagctatag
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