Siniperca chuatsi (mandarin fish): 122870118
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Entry
122870118 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122870118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122870118
04121 Ubiquitin system [BR:
schu04121
]
122870118
Membrane trafficking [BR:
schu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
122870118
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122870118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR55
DSE1_N
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
F-box-like
WDR90_beta-prop_4th
Beta-prop_EIPR1
NBCH_WD40
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_DCAF4
PAC11
Beta-prop_Aladin
CFAP251_N
F-box
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
TRM82_WD
PQQ_2
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
122870118
NCBI-ProteinID:
XP_044039854
LinkDB
All DBs
Position
LG22:complement(21339410..21380220)
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AA seq
719 aa
AA seq
DB search
MDGEHRERREEEEEEEEEERIDGLEERERGEKDRTLKTPSGRREEEEEEEEKELEMMKAG
AKVRRKLIGGHTPISTSSPFISSSLCRGGGGGEDGEEDEVRVAIVTIEDESCPSEPFGTA
HLETANQITRVEEAGGKKDEGEGAEEEEADREEANGDERGEEEETEVTSPSLHLQSQMKR
KLDHGPDGRPFPSGKKHCKGNAYLSPASLVQATPTTFGDLRLANGHSAQRRRVTSGPPPS
GLQDWLHTFQTWSGPERLLALDELIDRCETSQVKHMMQVIEPQFQRDFISLLPKELALYV
LTFLAPRDLLQAAQTCRYWRILAEDNLLWREKCREEGVSECASSRRRKCVRPGVAVSPWK
SAYIRQHRIENNWRKGDTREPMVLKGHDDHVITCLQFGGDLIVSGSDDNTLKVWSAITGK
CLRTLTGHTGGVWCSQMAVATVISGSTDRTLRVWDAESGECVHTLYGHTSTVRCMHLHGN
RVVSGSRDTTLRVWDVSTGRCEHVLTGHVAAVRCVQYDGRRVVSGGYDCMVKVWDPETEA
CLHTLQGHTNRVYSLQFDGXFVVSGSLDTSIRVWDAETGGCVHTLTGHQSLTSGMELRDN
ILVSGNADSTVRVWDVRTGQCLHTLQGPNKHQSAVTCLQFCRGLVLSSSDDGTVKLWDLK
TGAWLRDVVALQSRGSGGVVWRIRASDTRLVCATGSRNGTEETKLLVLDFDLDDKKETD
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacggagagcatcgagaaaggagagaggaggaggaggaggaggaagaggaggagagg
atagatggactggaagagagagaaagaggagagaaggacagaacactaaaaactccatcc
gggaggagagaagaagaagaggaggaggaggagaaggagctagaaatgatgaaggcaggc
gccaaagtacgaaggaagctgattggtggacacactccgatctccacctcctctcctttc
atctcctcctctctctgccgaggaggaggaggcggcgaggatggagaggaagacgaggtc
agagtcgccatagtcaccatcgaggacgagtcctgtccgtcggagcctttcggcaccgcc
cacctggaaacggccaatcagatcacacgcgtagaggaggcagggggcaaaaaggacgaa
ggggaaggagcggaggaagaggaggctgatagggaggaggcaaacggtgatgaaagaggg
gaggaagaggaaacagaggtgacgtcaccgtcgcttcacctgcagagccagatgaagagg
aagctggatcatggtccagacggccggccgttcccttcggggaagaagcactgcaaaggc
aatgcatacctgagtcccgccagtctggttcaagccacgcccaccacgttcggcgacctg
cggctagccaatgggcattcggctcagcggcggcgcgtcacctcgggcccgcccccatct
ggcctgcaggactggcttcataccttccagacgtggagcggtcctgagaggctattggct
ctggacgagttgattgacaggtgtgagaccagccaggtgaagcacatgatgcaggtcatc
gagccccagttccagagagacttcatatccctgctgcccaaagagttagctctgtacgtg
ctgaccttcctggctcccagagacctgctgcaggccgctcagacctgcaggtactggagg
atcctggctgaagacaacctgctgtggagggagaagtgccgcgaggaaggcgtgtcagag
tgtgcgtcgtctcgtcgcaggaagtgcgtgcggccgggcgtggcggtcagtccgtggaaa
tcggcctacatcagacaacaccgtatagagaacaactggaggaagggggacacacgagaa
cccatggtgttgaaaggtcacgacgatcacgtgatcacgtgtctccagttcggcggcgac
ctgattgtcagcggctccgacgacaacacgctcaaagtctggtccgccatcactggcaag
tgtctgcggacgttgacgggtcacaccggcggcgtgtggtgcagtcagatggcggtcgcc
acggtgatcagcggctccaccgaccggacgctgcgtgtgtgggacgccgagagcggcgag
tgtgttcacacgctgtacggacacacgtccaccgtgcgctgcatgcatctccacggcaac
cgggtggtgtcgggctcccgggacacgacgctgcgtgtgtgggacgtgtcgacgggccgc
tgcgagcacgtgctgacgggccacgtggcggcggtgcgctgcgttcagtacgacggccgc
cgcgtggtgtcgggcggctacgactgcatggtgaaggtgtgggaccccgagacggaggcg
tgtctgcacacgctgcagggacacaccaacagagtgtactcactgcagtttgatggcngc
tttgtggtgagcggctcgttggacacttcgatcagagtctgggacgcagagacaggtggg
tgtgtccacacgctgacgggccaccaatcgctgaccagcggcatggagctgcgtgacaac
atcctggtgtccgggaacgccgactcaacggtccgagtgtgggacgtccggacgggacag
tgtctccacacactgcaaggtcccaacaagcaccagtcggcggtgacgtgcctgcagttc
tgccgaggtctggtcctgtccagctccgacgacgggacggtcaaactgtgggatctgaag
actggagcctggctgagagacgtggtggcgctgcagagccggggatcaggcggcgttgtt
tggcgaatcagagcgtccgacactcggctggtgtgcgccaccggcagcaggaacgggacg
gaggagaccaaactgctggtgctggacttcgacctggacgacaagaaagagactgactga
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