Siniperca chuatsi (mandarin fish): 122870202
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Entry
122870202 CDS
T08948
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04145
Phagosome
schu04514
Cell adhesion molecules
schu04672
Intestinal immune network for IgA production
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122870202
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122870202
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122870202
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122870202
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122870202
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122870202
Exosomal proteins of epithelial cells
122870202
Exosomal proteins of breast milk
122870202
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
122870202
NCBI-ProteinID:
XP_044040125
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All DBs
Position
LG22:complement(24559491..24564488)
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AA seq
279 aa
AA seq
DB search
MIRSCDHVLWFLEQLSVRLCQCLSSEQRNMASSFLSFSLLFISLCSADGFLEYSVDRCVF
NSTDLKDIEYICSFYFNKVEDVRFSSSVGLFVGYTEPGLMYAKNWNKDLSYLAQMRAEKE
RYCEHNIGNWYSNILTKSAAPYVRLSSTAPSGGKHPSMLVCSVFDFYPQQIRVSWLRDGQ
EVTSDVTSTDELADGDWYYQIHSHLEYTPSRSGEKISCVVEHASLKEPLVTDWDPSMPES
ERNKIAIGASGLILGLILSLAGFIYYKRKARGRILVPTN
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtcatgtgatcatgtcctctggtttttagagcagctctcagtcagactgtgt
cagtgtttgtcaagtgaacagaggaacatggcttcatcctttctcagcttctcgctcctc
ttcatcagcctctgctcagcagatggatttttggaatattcagtggaccgctgtgtgttt
aactccactgatctgaaggacatcgagtacatctgctctttctatttcaacaaagtggag
gatgtgaggttcagcagcagtgttggattgtttgttggatacactgagcctggactgatg
tacgcaaagaactggaacaaagatctttcatatctggctcagatgagagctgagaaggag
aggtactgcgaacacaacatcgggaactggtacagcaacattctgactaaatcagcggcg
ccctacgtcaggctgagctccacggcgccctccggtgggaaacacccctccatgttggtc
tgcagcgtcttcgacttctacccccaacagatccgagtgagctggctcagagacggacag
gaagtcacctctgatgtcacttccaccgatgagctggcagacggggattggtactaccag
atccactctcacctggagtacacgcccagcaggtctggagagaagatctcctgtgtggtg
gagcacgccagcctgaaagagcctctggtgaccgactgggacccgtcaatgcccgagtct
gagagaaacaagatcgccatcggagcctcaggactgatcctgggtctgatcttatctctg
gctggattcatctactacaagaggaaggcccgaggaaggattctggttcccactaactga
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