Siniperca chuatsi (mandarin fish): 122870990 Help Entry 122870990         CDS       T08948                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism schu  Siniperca chuatsi (mandarin fish) Pathway schu04010   MAPK signaling pathway schu04120   Ubiquitin mediated proteolysis schu04140   Autophagy - animal schu04144   Endocytosis schu04620   Toll-like receptor signaling pathway schu04621   NOD-like receptor signaling pathway schu04622   RIG-I-like receptor signaling pathway schu05132   Salmonella infection schu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:schu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     122870990 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     122870990 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     122870990 (traf6)    04140 Autophagy - animal     122870990 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     122870990 (traf6)    04621 NOD-like receptor signaling pathway     122870990 (traf6)    04622 RIG-I-like receptor signaling pathway     122870990 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     122870990 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     122870990 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:schu04131]     122870990 (traf6)    04121 Ubiquitin system [BR:schu04121]     122870990 (traf6) Enzymes [BR:schu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      122870990 (traf6) Membrane trafficking [BR:schu04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     122870990 (traf6) Ubiquitin system [BR:schu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     122870990 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 Sina_ZnF RING_XB3-XBAT31 U-box TRAF3_RING zf-RING_11 zf-TRAF_2 zf-rbx1 Prok-RING_4 DM zf-RING_6 BLI1 DUF7310 Motif Other DBs NCBI-GeneID:  122870990 NCBI-ProteinID:  XP_044041445 LinkDB All DBs Position LG1:6742590..6751327 Genome browser AA seq 571 aa AA seqDB search MACFDSNKGSLEEDSYEGAVGGELSGCALAMLGKERESLLSPSESPGTFISSSSTSLQAA APVQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQRCPVDNE MLSEDQLFPDNFAKREILSLTVRCPNSGCAEKMELRHLENHLAHCQFATVPCLQCQQSVR KTHLEEHTTVECQRRPVSCPDCVAFFVYEEKELHEQQCPFANVKCQYCEMDFIRDQMESH YDTDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRSLSLNGTTPKSL WTLGPSVSSEDHGAAASVSACSGPRGAASCSSNCAPCQPTEEMQRLREMDGRLVKQDHQL RELIILKETQAGQLAELRRRVSMLEETVKELEAQQCHGIFIWRLKAFSVHLRNQEAGLPV VEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGSFDGQLTWPFQGTIRLA ILDQGPEGQHHMEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLHQLSQRAFVKDDALLI RCEVTPRFDNMLHREGPSVQPRGPESSVSRD NT seq 1716 nt NT seq  +upstreamnt  +downstreamnt atggcttgctttgatagcaataaggggagtttggaggaggacagctatgaaggagctgtt ggtggagagctgtccggctgtgcgttggcaatgctgggaaaggaacgggaatcccttctc agcccttcagagagccctggcaccttcatcagcagctcttccactagtcttcaggctgct gcccccgtccagggctatgacgtggagtttgacccacccctagagagtaaatatgagtgc cctatctgcctcatggctttgaggaatgccattcaaacaccctgtggtcaccgtttctgc aagaactgcattgagaagtccatccgtgatacggggcagaggtgtcctgtggacaatgaa atgctctcagaagaccagctgtttcctgataactttgccaaacgggagattctatcacta actgttcgctgtccaaactctggctgtgctgagaaaatggagctccgacatttagagaat catttggcacactgtcagtttgccactgtgccttgcctacaatgccaacagtctgtgaga aagacccacctagaggagcacacaactgttgagtgccaaaggagacctgtgtcgtgtccg gattgtgtggcattctttgtttatgaggagaaagagcttcacgaacagcagtgtcccttt gcaaatgtgaagtgccagtactgtgagatggatttcatcagagaccagatggaatctcat tatgatacagattgcccaaaagcacccatcgcctgtaacttcagcacctttggatgcaag gaaaggatgcagcggcacaacctggctcagcacatgcaggagttcacacaaatgcatatg cgctacatggctgagttcttgcgtagccttagcctcaatggcaccacacccaaatctctg tggacgctaggaccttctgtttcctctgaggatcatggagctgcagcatcagtatcagcc tgtagtggtcccagaggagctgcaagctgcagcagcaactgtgccccatgtcagcctacc gaggagatgcagaggctcagggagatggatggacgattggtaaagcaggatcaccagctg cgtgagctcatcatcttaaaagaaacacaggctggccagcttgcagagctcaggcgtaga gtgtcgatgctggaggagacagtgaaggagctggaggcccagcagtgtcacggtatcttc atctggcgcctcaaagctttctctgtccacctgcggaaccaagaagcaggcctgccagtg gttgagcacagccccggcttctacacaggccgtccaggctacaagctatgcctgcgcctc cacctgcagacccccaatgccccgcgttgctccaactatatctccctctttgtccatacc atgcaaggaagttttgatgggcagctgacctggccgttccagggcaccatccgccttgcc atcctagaccagggccctgagggtcagcaccacatggaggtgatggagactaaaccagac ctgcaagccttccagaagcccaccatccagcgcaaccccaaaggattcggctacgtcacc tttctgcacctgcatcagctaagtcagagagcctttgttaaagatgatgctctgcttatc cgctgtgaggtgacaccacgttttgacaatatgcttcaccgtgagggaccatcagtgcag cctagaggacctgagtcctcagtttcgagggactaa

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