Siniperca chuatsi (mandarin fish): 122871354
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Entry
122871354 CDS
T08948
Name
(RefSeq) filamin-C-like isoform X1
KO
K27393
filamin-C
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122871354
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122871354
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122871354
Intermediate filaments
Intermediate filament-binding proteins
122871354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
CH_2
Motif
Other DBs
NCBI-GeneID:
122871354
NCBI-ProteinID:
XP_044042305
LinkDB
All DBs
Position
LG23:complement(659515..729094)
Genome browser
AA seq
2774 aa
AA seq
DB search
MMSNSSYLEPPQFYQSTADIGEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCMN
KRINDLQKDLSDGLKLIGLLEVLSQKKMYRKYHSRPNFRQMKLENVSVALEFLEREHIRL
VSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQNKVP
QLPITNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGVPQV
IAPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRAKTLHPKRAKAYGPGIEPRGNVVLK
PAEFLVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRTYSVVYLPKVEGLHKVKVLF
AGQDIDRSPFLVNVSKAMGDPSRVQARGPGLQSTGNVANKPTYFDIYTAGAGAGDVGVII
VDSNGRRDTVEIVLENKGDSIFRCTYVPVLEGPHTVYVTFAGQQIPRSPFTVQISEVSQS
VPPPGSPVQIVPQCTRTPPSDKTRRGPPPTPPKPRRPTCNPNACRASGRGLQPKGLRVKE
VADFKVYTKGAGSGELKVTVKGPKGLEEPVKVLEMENGMFECNYYPIMTGKYIVTITWGG
HSIPRSPFEVQVSEEAGPQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEGPSQ
AKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAASDVFPENVKCY
GPGLEPLGCIVNKPADFTIDTHEAGRGELKLYAQDAEGFPIDIQITDNGDSTYFCVYIPT
KPIKHTIIITWGEVNVPNSPFRVTIGEGSHPENVKVYGPGVEKTGLKANEPTYFTVDCSE
AGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGQYTIMVLFADQEIP
ISPFRIKVDPSHDAAKVRAEGPGLNRTGVEVGKPTHFTIYTKGAGKAQPEVHFTGAAKGE
AVRDFEIIDNHDYSYTVRYTAVQQGNMSVTVCHGGDPIPKSPFNISVAPPLDLSKVKVQG
LNNKVDVGKDEEFTVSTQGAGGQGQLDVKITSPSRRPIPCKLESGTANEMHTVKYIPPEE
GPYRVDISYDGNPVPGSPFTVEGVMPPDPSKVRAYGPGLQGGVVGKPAPFAIDTKGAGTG
GLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFADQHIPGSPFKAMVQSAF
DPSKVTASGPGLERGKVNEDGSFTVDCSKAGEAELTIEIISDSGAKAEVHVQNNRDGTYS
ITYIPQFHGMYTITIKYGGHAAPKFPARLQVDPAVDTSGVKVYGPGVEPRGVLREVTTHF
IVDARAHYKSGGSHIKACVSNPSGANTDTYITDKGDGTYRVEYTPYEDGLHLIEVLFDEI
SVPKSPFRVSVTEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGTGGLGLAIEGPSEA
KMSCKDNKDGSCSVEYIPFTPGEYDVNITFGGLPIPGSPFRVPVRELVDPSKVKCSGPGL
GSGVRAHVPQTFTVDSSKAGVAPLEVQLYGPTGVAEPISITDNNDGTHTVNYTPANDGPY
TVCVKYADQEVPRSPFKIKTLPAHDASKVRASGPGLNASGVPASLPVEFTIDARDAGEGL
LTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMTGRYTITIKYGGDEIPYSPYRIHALPT
GDASKCLVTVSIGGHGLGSGIGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAELDVD
VVENADGTFDIYYTAPEPGKYVITIRFGGENIPNSPFHVVASDTVPIIEEPCDKLQLQQP
YTPYVGFSPRWATDDPISPVDGMEPMLRPFSLVIPFTVQKGEITGEVRMPSGRTACPHIT
DNKDGTVTVKYSPTERGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGTVN
RPATFTIVTKDAGEGGLSLAVEGPSKAEISCKDNKDGTCTVSYLPTAPGDYNIIVKFDDK
HIAGSPFTAKITGDESMRTSQLNVGTATDVSLKITETDLSSLTASIRAPSGNEEPCLLKR
LPNRHIGISFTPKEVGEHVVSVKKNGKHVTNSPFKIMVGQSEIGDASKVKVYGQGLVEGH
TFEVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINIKFA
DQHVPGSPFTVKVFGEGRMKESITRKRQAPSIATVGSTCDLNLKIPGNWFHMVSAQERLT
RTFTRSSHTYTRTERTEISKTRAGETKREVRVEESTQVGGEPFRDVFGDFLGRENLSGFN
GMPAGSRPPLQDGETSNQEMTAQVTSPGGKTEDAEIIKGEDSTYSVRFIPQEMGAHTVNV
KYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGIPAEFSIWTREAGAGGLSIA
VEGPSKAEITFEDRKDGSCGVAYIVQEPGDYEVSIKFNDEHIPDSPFIVPIATLSDDARR
LTITSLQEMALKVGQEASFAVQLNGARGLIDAKIHTPSGAIEECYITELDSDQHAIRFIP
RENGVHSIDVRFNGSHVPGSPFKIRVGEPGQVGDPGMVSAFGPGLEGGTTGVASEFIVNT
CNAGSGALSVTIDGPSKVKMDCQDCPEGYKVSYTPMAPGHYLIAIKYGGPQHIVGSPFKA
KVSGPRLSGGHSLHETSSVLVETVTKSSAMGGAFASLPKFSSDASKVISRGAGLSKAFVG
QKNTFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHMGNRMYNVTYTVKEQGSYILIVKWG
DENVPGSPFHVTVP
NT seq
8325 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaacagcagctacttggagccgccgcagttctaccagagcaccgcggacatc
ggcgaggaggaggaggagatgccggccaccgagaaggacctggccgaggacgctccgtgg
aagaagatccagcagaacaccttcaccaggtggtgcaacgagcacctcaagtgcatgaac
aagcggatcaacgacctgcagaaggacctgagcgacgggctgaagctgatcgggctgctg
gaggtgctgagccagaagaagatgtacaggaagtatcactccagaccgaacttcagacag
atgaagctggagaatgtttccgtcgctctggagttcctggagagggaacacatcagactg
gtttccatcgactctaaagccatcgtggacgggaacctgaagctgatcctgggtctcatc
tggaccctgatcctgcactactccatctccatgcccatgtgggaggacgaggacgacgaa
gacgccaagaaactgacccccaaacagcgtctgctgggctggatccagaacaaagtgccc
cagctccccatcaccaacttccaccgagactggagggacggcaaggcactgggagctctg
gtggacaactgcgcccctggtctttgtccagactgggaaacatgggatcccagtcagccg
gtggagaacgccagagaggccatgcagcaggctgacgactggctcggagtgccacaggtg
atcgctccagaggagatcgttgatcctaacgtggacgagcactctgtgatgacctacctg
tctcagttccccaaatcgaaactgaagcccggtgcccccctgagggcgaagacgctgcac
ccgaagagggccaaagcctatggaccaggtattgagcctcgaggtaatgtggttctgaaa
ccagcagagtttctggtggagacggtggaggccggactgggtgaagtcctggtttatgtg
gaagatccagagggacacacagaggaggcccgagtgatccccaacaatgacaagaacaga
acctactctgtggtctacctgcccaaagtggaggggcttcataaagtgaaggtgctgttt
gctgggcaggacatcgacagaagtcccttcttggtgaatgtttcgaaggccatgggcgac
ccaagcagagttcaggcccgcgggccgggactgcagtcgacgggaaatgtggccaacaaa
cctacatactttgacatttacactgcaggggcgggtgctggagatgtaggcgttattatt
gtggattcaaacggtcggagggatacagtggagattgtcttggagaacaaaggcgacagt
attttccgctgcacctatgttcccgtcctggagggacctcacactgtctatgtgaccttt
gctgggcagcagattcccagaagccctttcactgtccagatctcagaggtttcacagagc
gtcccacctccggggtctccggtgcagattgtacctcagtgcacacgcaccccaccctca
gacaagacaaggagaggcccccctccaacaccgcccaaacccaggcgaccaacttgtaac
ccgaacgcctgccgggcgtcgggcagaggtctgcagccgaagggtctgagggtgaaagaa
gtggcagattttaaagtttacactaaaggagccggcagcggagaactcaaagtcaccgtg
aagggaccaaagggcctggaggagccggtgaaggttcttgagatggaaaacggtatgttt
gagtgtaattattaccccatcatgacaggaaaatacatcgtaaccatcacctggggagga
cacagcatcccacgcagtccattcgaggttcaggtgagtgaggaggcggggcctcagaag
gtgagggcctggggtccaggtctggagaccggcatggtggggaagagtgctgactttgtg
gtggaggccatcggcacggaggtgggaacactcggtttctccatcgagggtccgtctcag
gcgaagatcgagtgtgatgataaaggtgacgggtcatgtgatgttcgttactggccgact
gagccgggcgactacgctgtgcacgtcatatgtgacgacgaggacatcaaggacagtccc
ttcatggctcacatcctccctgctgccagtgacgtcttcccagaaaacgtgaaatgttac
ggtccaggtctggagccgctgggctgcatcgtcaacaaacccgctgatttcaccatcgat
acccacgaagccggcagaggagagctgaagctctacgctcaggatgcagagggtttcccc
atcgacatacagatcacagataacggagacagcacctacttctgtgtttacattcccaca
aaacccatcaaacacaccatcatcatcacctggggcgaagtcaacgttcccaacagcccc
ttcagggtgacgataggagaaggcagccatccagagaacgtgaaggtttacggtccaggt
gtggagaagacgggactgaaggccaacgagccgacgtacttcactgtggactgcagcgag
gccggacagggtgatgtcagcattgggatcaagtgtgctccaggtgtggtcggtcccgca
gaggccgacatcgactttgacatcatcaagaacgacaacgacacgttcacagtgaagtac
acgcctccgggtgccggtcagtacaccatcatggtgctgttcgctgatcaggaaattccc
atcagccccttcagaataaaggtggatccttcccatgatgcagctaaagtccgagcagaa
ggacccggactcaacaggacaggagttgaagtgggtaaaccgactcacttcaccatttac
acaaagggagccggtaaagcccaacctgaggttcatttcaccggagcggctaaaggtgaa
gctgtcagagacttcgagatcatcgacaaccacgactactcgtacaccgtccgctacacc
gcggtccagcaggggaacatgtccgtcactgtgtgtcacggaggagaccccatccctaaa
agtccatttaacatcagtgtggcccccccgctggacctcagcaaggtcaaagttcagggt
ttgaacaacaaggtggatgttgggaaggacgaggagttcaccgtcagcactcagggtgcc
ggaggtcagggccaactggacgtcaagatcacctcaccgtcacgtcgaccaatcccctgc
aagctggagtcgggcacagccaatgagatgcacacagtgaagtacattccccccgaggaa
ggaccgtacagagtggacatcagctacgacggaaaccctgtaccaggaagtccgttcact
gtggagggcgtcatgccccccgacccttcaaaggttcgagcctatggtccaggtcttcag
ggtggtgttgttggtaaaccggccccctttgccattgacacaaagggagccggtaccggt
ggtctgggcctgacggtggagggaccctgtgaggccaagattgaatgccaggacaacggt
gatggatcctgctccgtgtcctacctgcccacagagcccggcgagtacgccatcaacatc
ctgtttgcagaccagcacatccccgggtcccccttcaaggccatggtccagtctgcgttt
gaccccagcaaggtgacggccagcggccccggcctggagcgagggaaagtcaacgaggac
ggatccttcacagtggactgctctaaagccggagaggccgagctcaccatcgagatcatc
tccgactccggagccaaagctgaagttcacgtccagaacaaccgggacgggacctactcc
atcacctacatcccccagttccacggcatgtacaccatcaccatcaaatatggaggacac
gcagcgccgaagttccccgcccgactacaggtggacccagcggtcgacaccagcggggtg
aaggtctacggaccaggagtggaacccagaggcgtcctgagggaagtgaccacccatttc
atagtggacgcccgggcccactacaagagcggcggcagccatatcaaagcttgcgtctcc
aatccatctggcgccaacacggacacctacatcaccgacaaaggagacgggacctacaga
gtggagtacacaccctacgaggacggtttgcatctgattgaagttttgtttgacgagatc
tcggttcctaagagtccattcagggtgtcggtgactgaaggttgtgatcccagtcgagtc
cgagcctacggtccaggcctggaggaaggactggttaacaaaccaaaccgcttcactgtc
gagaccagaggtgctggcaccggaggtcttggcctggccattgagggtccatctgaggca
aagatgtcgtgtaaggacaacaaagatggtagctgcagtgtggagtacatccccttcact
cctggagagtacgatgtcaacatcaccttcggaggcctgcctatcccagggagcccattt
cgggttccagtgcgagagctggtggatcccagtaaagtgaagtgttcaggtcccggcctg
ggaagtggagtccgagcccacgtccctcagaccttcactgtagacagcagcaaggctggg
gtggcccccctggaggtccagctgtatgggcccacaggtgtggccgagccaatcagcatc
accgacaataacgacggtactcacacagtcaactacactcctgccaacgacggcccgtac
acggtgtgtgtgaagtacgccgaccaggaggtccctcgcagtccttttaagatcaagact
ctaccggctcatgacgccagtaaagttcgagccagcggtccaggtctgaatgcatccgga
gttccagccagtctgccggttgagttcaccatcgatgccagagacgccggagagggactg
ctcactgttcagatactggatccggagggaaaacccaagaaggcgaacatccgagacaac
agagacgggacgtacacggtgtcctacgtaccggacatgacgggacgttacaccatcacc
atcaaatacggaggagacgagatcccatactcaccgtaccgcatccacgccctgcccacc
ggagacgccagcaagtgtctggtcacagtgtcaatcggagggcacggactgggatcaggt
atcggcccgaccatccagatcggagaggagacggtcatcaccgtagatgcaaaggctgct
gggaaaggtaaagtcacctgtaaggtgtcgactcctgacggagcggagctggacgtggac
gtggtcgagaacgctgacgggacgtttgatatttactacacggctccggagcccgggaag
tacgtcatcactatccggtttggaggggagaacattcccaacagccccttccacgtggtg
gcgagcgataccgtcccaataatagaggaaccatgtgacaagctccagttacagcagccc
tacactccctatgtgggcttctcccctcgatgggccaccgatgatcccatcagccccgtg
gacgggatggagcccatgctccgccccttcagtctggtcattcccttcactgtgcagaaa
ggagagatcacaggtgaagtgcgaatgccgtcgggtcgaaccgcctgtcctcacatcacc
gacaacaaggacggcacggtcactgtgaagtactccccgacagaacgaggcctgcacgag
atggacatcaaatatgatggaaaccatatcccaggaagtccactccagttctacgttgat
gccattaacagtggtcatgtgacggcgtacggccctggtctgagccacggcacggtgaac
agaccggccaccttcactatcgttactaaagacgctggagaaggtggtctgtctctggct
gttgaaggtccgtctaaagcagagatcagctgtaaagacaacaaagacgggacctgtact
gtgtcctacctgcccaccgcacctggagactacaacatcatcgtcaagtttgatgacaaa
cacatcgctggcagccccttcaccgccaagatcactggtgatgagtccatgaggacgtct
cagcttaacgttggcacggcaacagatgtttccttaaaaatcacagagacggacctgagc
agtctgactgcgagcatcagagcgccatctggaaacgaggagccgtgtctgctgaagagg
ctgcccaacagacacatcgggatctcgttcacaccaaaggaagtaggcgaacacgtggtg
agtgtgaagaagaacgggaaacatgtgaccaacagtccctttaagatcatggtgggtcag
tcggagatcggagacgccagtaaggtgaaggtttacggtcaggggctggtggagggacac
accttcgaggtggccgagttcatcgtcgacacaaggaacgcaggttatggaggtctgggt
ctgtccatcgagggtcccagtaaggtggacattaactgtgaggacgtggaggacgggacg
tgtaaagtcacttactgtccaactgaacctggaaactacatcatcaacatcaagttcgct
gaccaacacgtcccaggaagtccgttcacagtgaaggtgtttggtgagggccggatgaag
gagagcatcaccaggaaacgtcaggctccctccatcgctactgtgggcagcacctgcgac
ctcaacctcaaaataccagggaactggtttcacatggtttcggctcaggagcgtctgact
cggacgttcactcgcagcagtcacacctacactcggaccgagcggacggagatcagtaag
actcgagcaggagagacgaagagggaggtccgtgtggaggagagcactcaggtgggagga
gagccgttcagagacgtgttcggagacttcctgggacgtgagaatctgagcggattcaac
gggatgccggccggcagccgaccgccgctgcaggacggtgagacaagtaaccaggagatg
acggctcaggtgacgagtcctggaggaaagacggaggacgcagagatcattaaaggagag
gacagcacctacagcgtccgcttcatcccccaggagatgggagctcacactgttaacgtt
aaatatcggggccaacacgtccccgggagccccttccagttcactgtggggcccctggga
gagggaggggcccacaaggtccgagcagggggaaccgggctggaccgaggagtggcaggg
atcccagctgagttcagtatctggaccagagaggccggagctggaggtctgtccatcgct
gtggagggaccaagcaaggccgagatcacctttgaagacaggaaggatggatcctgtgga
gtcgcctacatagttcaggagcctggtgactatgaggtttccattaagttcaacgatgaa
cacatcccagactctccgttcatcgtccccatcgccactctgtctgatgacgctcgccgc
ctcaccatcaccagcctgcaggagatggcactgaaagttgggcaggaggcctcctttgct
gtacagctgaatggagccagagggctgatcgatgctaagatccacacaccatcaggagcc
atagaggagtgctacatcactgagctggacagcgaccagcatgctatcaggttcatcccg
agggaaaatggagttcattctatcgacgttcgtttcaatggcagccatgttcccggcagt
cccttcaagatccgagtgggagaaccaggccaggtcggagatcccggcatggtgtctgcc
ttcggaccggggctggagggaggaaccacaggcgtggcgtcagagtttattgtgaacacg
tgtaatgccggctcaggagctctgtcagtgaccatcgacgggccatcgaaggtgaagatg
gactgtcaggactgtcctgagggctacaaggtctcctacacacccatggctcccggacac
tacctgatcgccatcaagtacggaggaccccagcacatcgtaggcagccccttcaaggcc
aaagtctcaggacctcgtctgtccggtggccacagtctgcatgagacatcgtctgttctt
gtggaaactgtcaccaagtcatcagcgatgggaggggccttcgcctccttacccaaattc
tcctcagacgccagtaaagtcatctccagaggcgctggcctatcgaaggccttcgtaggt
cagaagaacacgttcacagtcgactgcagcaaagcaggcaccaacatgttgatggtgggc
gttcacgggccgaagacgccctgtgaggaggtgtatgtcaaacacatgggcaacaggatg
tacaatgtcacgtacacggtcaaagaacaaggcagctacatcctcatcgtcaaatggggg
gacgagaacgtccccggcagtcccttccacgtcactgtcccttaa
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integrated database retrieval system