Siniperca chuatsi (mandarin fish): 122872035
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Entry
122872035 CDS
T08948
Name
(RefSeq) zinc finger protein GLI4-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122872035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122872035
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
122872035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
122872035
NCBI-ProteinID:
XP_044043606
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Position
LG24:2433752..2522261
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AA seq
1357 aa
AA seq
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METSTSRATEKKDKMDGNGFSDLPKKPSPSETRAPHHIFPTFHTPIPIDMRHHEGRYHYE
PHALHAMHGPAGLAGSPVISDISLIRLSPATVATGDSPFSPPHPYVNPHMEHYLRSVHGS
PTLSMISAARGLSPADLSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVA
YINNSRSSSAASSSYGHLSVGGLSPSFPFPHPINPMAYQQLLSQQRGLSAFGHTPPLIQP
PPTFSSRQPGLGLSSLPTSAHNSDLPSKNLSGDSAVSSTVDPMITKRSKVKIEAEGLRPL
SPCSPNHHGSLLDLKDDVDRDECKQEPEAVYETNCHWEGCSKEYDTQDQLVHHINNDHIH
GEKKEFVCRWEDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHL
RSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKH
VKTVHGPEAHVTKKQRSDLPPRPPAPRENGENETGNRERIQREDKISNNSSPRGMEDYLH
VKSIKTESSVMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAAHSGGSLGDLTTLDDLPF
VESLGCEDSTGGVAVVGLHFRKQLGTSQRLEHLKKEKLKTVRDSCRWASNPTPPVLGTKL
PPIPASGSLLESPSMGGGPVSFPGYVLGDLSSGKMTLLENLSERRDSTSSTLSSVYTLSR
RSSGISPCYSSRRSSQASQFGANRPSNLSSADSYDPISADISRRSSQASQCGGSSGGAGG
CGGGGPLSLTPAQHYRLKAKYAAATGGAPPTPLPYMDQMCLKTHTALYGDSQETSTTNKG
LLSRQYSSYTTRSLMPHEVPSNIPRRASDPVRRVATDYVSRPQMQRYNSMGTLSGGVTMQ
PHPPPAADRQQGCLRSDGSLHRYPYSLRPPSILENVTMEMITSDISDPKEDLMLPDLSTD
NRDSTNRVSTIQQDFQGNPNFQQQSYYQRRMAVVNTKVSLGHMDASQHYSKLQVRGNLAV
LQQNQNFGSFHNNLSCNQQMIQNFIKTTQQRCKQLNTEPGANCFQQQRFQQSSNLNEAIS
SQYRFNEDISPYDKNGNNTDPPCNNTTAVSGRILSPTCKQEPDDMDTVDMHFADAGFQPV
QVKIEDRDGSIMISDQQNCNMTTQNPLQTGNQSHLQPRPPTEPKSLNRHHSGHPSNANPD
VASKLPSNGVLGLHCSDNSDDNAMYYTGQIQVFEPNGNLDHHVSPVVNVPPFENDAVSSS
SGNNQASRTVDCNAALEQAQIDFDSMLDDGDHSSLMSGTLSPGLLQSFSQSSSRLTTPRN
SVTLPSVPVATGNMAIGDMSSLLTALAEENKFLNLMS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggagacttccacatcgagagccaccgagaagaaagacaaaatggacgggaacggattc
tccgacctcccaaagaaaccctcaccctcagagacgcgagccccccaccacatcttcccc
accttccacacaccgatcccgattgacatgcgccatcacgagggacgataccactatgag
cctcacgcgctgcacgccatgcacggccccgcaggtttggctggcagccccgtcatctcc
gatatctccctgatccgcctttcacccgccaccgtggcaaccggtgactctcccttcagc
ccgcctcacccgtacgtcaaccctcacatggagcactacctgcgctctgtgcacggcagc
cccaccctgtccatgatctcagcagccagaggactcagccctgccgacctgtcgcggttc
tccagccccagactgacgcccaggctgagcaggaagagggctctgtccatctcgccgctg
tcggacgccagcatcgacctccagacgatgatccgcacctcgcccaactcgctggtcgcc
tacatcaacaactcgcgctccagctcggctgccagcagctcctacggacacctgtcggtc
ggaggactcagcccgtccttccccttcccacatcccatcaaccccatggcctaccagcag
ctcctctcccagcagcgggggctcagcgccttcggccacactccgcctctcatccagcct
ccgcccaccttctccagccgccagccgggcctcggcctctcctccctgcccacctccgcc
cacaacagcgacctgccgtccaagaacctcagcggtgactctgcagtcagcagcacagtt
gaccccatgatcaccaaaaggtcaaaggtcaagattgaagcagagggattgaggccgttg
tctccttgttcaccgaaccatcatggcagcttgctggacttgaaggatgacgtggaccgg
gatgaatgtaagcaggagcccgaggccgtttatgagaccaactgccactgggagggctgc
agcaaggagtacgacacgcaagaccagctggtccatcacatcaataatgaccacatccac
ggagagaagaaggagtttgtgtgccgctgggaggactgttcgcgggagcagaagcccttc
aaagctcagtacatgctggtggttcacatgcgccgacacacaggggagaaaccacacaag
tgcacgttcgagggctgctctaaggcctactcccgtctggagaatctcaaaactcatctg
cgctcgcacaccggcgagaaaccttacgtctgcgagcacgaaggctgcaacaaagccttc
tccaacgcctcggaccgagccaaacaccagaaccggacacactccaacgagaaaccctac
gtatgtaagatccccggttgtaccaagcgctacacagatcccagctctctcaggaagcat
gtgaagacggtccatggccccgaggcccacgtcaccaagaaacagcgcagcgacctgccg
ccgaggccgccggcgcccagggagaacggcgaaaacgagacgggtaacagagagagaatc
cagagggaagacaagatatcaaacaacagctcccccagaggcatggaggactacctgcac
gtcaaatccatcaagactgaaagctctgtgatgtatcagtccagccctggcggtcagtca
tcatgtagcagcgaaccatcaccacttggcagtgccaccaacaatgacagtggagtagaa
atggcggcgcacagcgggggaagcctgggggacctcaccacccttgacgacctgcccttc
gtggagtccttgggctgtgaagattccaccggcggggtcgcggtggtcggtctccacttc
cgaaagcagctcggcaccagtcagcgcctggagcatctgaagaaggagaagctgaagaca
gtgagggactcgtgtcggtgggccagcaacccaacacccccagtcctcggcaccaagctc
ccacccataccagcaagcggatccctcctggaaagtccaagtatgggtggtggtccggtg
tccttccctggttacgtcttgggtgatctgagctctggtaaaatgactctgttggaaaac
ctttcagagcgccgtgacagcacctccagtaccctgagctcagtttacaccctcagccgc
cgctcctcaggcatctccccttgctactctagtcggcgctccagccaggcctcgcagttc
ggtgccaaccgccccagcaaccttagctctgctgactcctacgaccccatctctgctgac
atctcacggcgctccagtcaggccagccagtgtgggggaagcagcggaggagcaggaggg
tgtggaggagggggccccctcagcttgaccccagcccagcactaccgcctcaaggcgaaa
tacgctgctgccactggaggtgcaccgcctacgcctcttccatacatggaccaaatgtgt
ctgaagacccacacagccctgtatggggactcccaggaaacctccaccaccaataaaggc
ctgctttccaggcagtacagcagctacaccacgcggagcctgatgccccatgaggtcccg
tctaacatcccccgccgagccagtgaccctgtgagacgtgtggccacagattatgtcagc
cggccacaaatgcaacgctacaacagcatgggcacactgagtggaggggtgaccatgcag
ccccatccgcctccagcagcagatcgccagcaaggctgcctgcgatcagatggtagtctc
caccgttacccttacagcctgcgaccgcccagcattttggagaacgtcaccatggagatg
ataacgagtgacataagtgaccctaaggaagacctgatgctgcctgacctcagcactgac
aacagagactcaaccaacagagtgtcaaccattcaacaagatttccaaggaaaccccaat
ttccagcagcagtcgtactatcagagaaggatggctgtcgtgaataccaaggtctctttg
ggacatatggatgccagccagcactactccaaactacaggtcagagggaacctggctgtc
ctccagcaaaaccagaactttggatcttttcacaacaatctcagctgcaaccagcagatg
attcaaaacttcattaagacaacgcagcagagatgcaaacagctgaatactgaaccagga
gcaaactgcttccagcagcagagatttcagcagtcgtcaaatctcaatgaagcaattagc
tctcagtacaggttcaacgaagacatcagtccatatgataagaatggtaacaacactgac
ccaccttgtaataacacaacagcagtcagtgggagaatactaagccccacatgcaaacag
gagccagatgacatggacactgttgacatgcactttgctgatgctggatttcagcctgtg
caagttaaaattgaagaccgtgatggatcaatcatgatttcagatcagcagaactgtaac
atgaccacccagaatcccttgcaaactgggaatcagagccatctccagccaaggccacca
acagaacctaaatctctaaacaggcaccattcagggcacccaagtaatgctaacccggat
gttgcttccaaattacccagtaatggagttttaggacttcattgcagtgacaactctgat
gacaatgccatgtactacacagggcagattcaagtatttgagcccaacgggaacttggac
caccatgtttctcctgtggtgaatgtacctccttttgaaaatgatgcagtgtcttccagt
tcaggaaacaaccaggcgtcaaggactgtagactgtaatgcagcactggagcaggcacag
atagactttgacagcatgctggacgatggggatcactccagcctcatgtcgggaaccttg
agtccaggtctgctccagagcttttcccagagttcctctcgcctgacaacgcccaggaac
tcggtcacgttgccctcggtgccggtggcaacggggaacatggccatcggggacatgagc
tcattgctgactgctctggcagaagagaacaagttcctcaacttgatgtcttag
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