Siniperca chuatsi (mandarin fish): 122873170
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Entry
122873170 CDS
T08948
Symbol
socs7
Name
(RefSeq) suppressor of cytokine signaling 7 isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122873170 (socs7)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
122873170 (socs7)
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
122873170
NCBI-ProteinID:
XP_044045475
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Position
LG3:3497734..3517993
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AA seq
858 aa
AA seq
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MNNAQDMSPDFVLMRLVSAAEDDRLDAENGNLPPGGVVAGLGKEVLAHSGVKAGLDISRD
PTAGLEHPSSRLNKAQPSGEGTAAPDTGVTENRAPLSAPPPPQSPMEAQGFDFAPSPGLR
PQLLVFSNIMRNGEGILELDRRNQPRDALGLDQSPGSGCSGPTVNNNTLTPGDVQQQQNL
LDRTWGAHPPLSVTAEMQGAAELCRRHRLITTPPEWPLLSERSNPLSVIDSKWGCATRDR
EGAVFELARRFGELGVGAVPKMLFKAGELPQCSCQGAHGPAGGGVEPGDDPTETSDALLV
LEGLGSGDVAGLGMDECPEGETDDENGRREFLLNRKREIVQKMSGAFSISSFQAELRRQV
EGMAPAATEAAAAAHLGAQVCSLHGNLASRLSQVSSGDSEVVSQVSAVSPSPTPVRSSPW
ATSPNLSQASTPRRRPERCASAPRTPTGCAAGREKTLKVPGMSKKGSLKIRLSKLFRTKS
CSGSNHLLDKRPSVTYSVSSAGSLVDMASTAGAEQDADSHSQPRLTRAHSAFSPASLSAS
LSAFTGETVSLVDVDISRRGANTPHPPTPPPPPRRSLSLLDDIAGPQPGPFLVSVMGASL
QSLPLPLPPPPPPSHATIQHSLSLNDAFLRALPHSAPSLADAPPPSRQAPPPMLCALRRS
EASNFTASLRELEKCGWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGV
THHTRMEHYRGTFSLWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPV
QLLYPVSRFSNVKSLQHLCRFCIRQMVRIDHIQELPLPRPLISYLSKFYYYDPEEEMYLS
VKSIRRVVGAEQEAESQT
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgcgcaagatatgtcgcccgatttcgtgttgatgcgcctggtttccgcggcc
gaggatgaccgcttggacgcagaaaacgggaatctgccgccgggaggagtggtggcaggg
ctggggaaggaggtcctggctcacagcggcgttaaagcggggctggatatcagccgagat
ccgacggcgggcctcgagcatcccagcagccgcctgaacaaagcccagccgagcggcgag
ggcacggctgcacctgacaccggggtgacggagaaccgagccccgctgtccgcgcctcct
ccgccgcagagccccatggaggcccagggctttgacttcgctcccagccccggcctacgg
cctcagctgctggtcttctccaatataatgcggaacggagaagggattttagaattagac
cgtcggaatcagccgagggatgctctgggtttggaccagagcccggggtctggctgctcc
ggcccgactgtcaataacaacaccctgactcccggagacgtccagcagcagcagaacctg
ctggaccggacatggggagcgcatccgccgctctccgtaactgcggagatgcagggagct
gcggagctatgccgccgacatcgactcatcactaccccgcccgagtggcccttgttgtcg
gagagatccaaccctctctccgtgattgactctaaatggggatgtgccaccagggacaga
gagggagcagtgtttgagctggcccggcggtttggagagctgggggtcggtgcggtaccc
aagatgttgttcaaagcaggggagctcccgcagtgttcgtgtcagggtgcacacgggccg
gcaggagggggagtggagcccggggatgacccgacagagaccagcgatgctttgttggtc
ctggaggggctggggagcggggatgtagccggactgggcatggacgagtgcccggagggt
gagacggacgatgagaacggacgccgcgagtttttactcaacaggaaaagggaaatagtt
cagaaaatgtccggggctttctccatcagcagcttccaagcggagctgaggaggcaggtg
gaggggatggccccggcggcgaccgaggcggcggcagcagcgcacctcggcgcgcaggtg
tgcagcctccacgggaacttagccagccggctctcgcaggtaagctccggggattcagag
gttgtctcccaagtttcagccgtgtcaccgtcacctacaccggtccggagctccccttgg
gccacgagcccaaacctgagccaggcgtcgacacccagaaggcggccggagcggtgcgcc
agtgcgccgcggactcccacaggctgtgccgcgggtcgggaaaagacgctcaaagttccg
gggatgtccaaaaagggctcgttaaagatccgcttgagtaaactgttccggactaaaagc
tgcagcggctccaatcacctgctggacaagaggccctcagtgacctactcagtttcttct
gcagggagtctggtggacatggcgagcaccgctggtgctgagcaggacgcagacagccac
agccagcccagactgaccagggcccacagtgccttctcccctgcctcgctctctgcctcg
ctctctgctttcactggtgagactgtttccctggtggatgtggatatttcgcggcgaggg
gcgaatacgccacaccctcccacgcctccccctcctccacgccgaagtctcagtttgtta
gatgacatagccgggcctcagcctgggcctttcctagtgagtgttatgggcgcctccctg
cagtccctccccctgcctctccctcctcctcctcctccctcccacgccaccatccagcac
agtctcagcctcaatgacgccttcctccgggccctccctcattcagctccatcactggct
gatgccccacccccttccagacaggccccgcctcccatgctgtgcgccctgcggcggtct
gaggccagcaacttcaccgccagtctgagagagctggagaagtgtggctggtactggggt
ccgatgaactgggaggacgcagagatgaagctgaaggggaaaccagatggatccttcctg
gtccgagacagttcggacccccgatacatcctgagcctcagcttcaggtcgcagggggtc
acacaccacacacgcatggagcactaccgagggacgttcagcttgtggtgtcacccgaag
tttgaggaccgttgccactcggtggtggagttcatcgagcgagccattatgcactccaag
aacggcaaattcctctacttcctgcgctccagagtcccagggcttcctcccaccccggtt
cagctgctgtatcctgtatctcgcttcagcaacgtgaagtcactacaacatctctgtcgc
ttctgcatccgacaaatggtccgcatcgaccacatccaggagcttccactgcccagacca
ctaatatcctacctgagtaagttttattactacgaccccgaggaggagatgtacctgtca
gtcaagagcatccggagagtggtgggagcagagcaagaggctgagtcgcagacgtag
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