Siniperca chuatsi (mandarin fish): 122873189
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Entry
122873189 CDS
T08948
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122873189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122873189
04121 Ubiquitin system [BR:
schu04121
]
122873189
Membrane trafficking [BR:
schu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
122873189
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122873189
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR41
WDR55
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_RIG_2nd
ASA1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_RIG_1st
TRM82_WD
F-box
Beta-prop_NOL10_N
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
WD40_RFWD3
PQQ_2
Beta-prop_IFT140_2nd
Ge1_WD40
Beta-prop_NWD2_C
Beta-prop_LRRK2
Beta-prop_IFT140_1st
KNTC1_N
eIF2A
CDtoxinA
Beta-prop_IP5PC_F
Beta-prop_pof12
PALB2_WD40
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
122873189
NCBI-ProteinID:
XP_044045516
LinkDB
All DBs
Position
LG3:10280591..10349621
Genome browser
AA seq
615 aa
AA seq
DB search
MLRHCPIPRFSSGARRKMPNVACGKEKTLHVPLESKPLNLADPKDVATEPLPPQKVLKIF
SINIIAQGLPFCRRRMKRKLDHGPEVRSFPSGKKPCKGPEYPSPTGIVPCPATPTTFGHI
RTANGQGQQRRRITSIQPPTGLQEWLRTFQSWTGPEKLLALDELIDSCEPTQVKHMMQVI
EPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCREEGIDE
PLPPKKRKIGKPGFTHSPWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGN
RIVSGSDDNTLKVWSAITGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE
CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR
RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN
CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQF
NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT
EETKLLVLDFDVDMK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcattgccctattccccgtttctcgtctggtgctcggagaaagatgccaaat
gttgcctgtgggaaagagaagactttgcacgtcccgctggagagcaagccactcaacctg
gcagaccccaaggacgttgccacggaaccgctaccccctcagaaagtactcaagatattt
agcatcaacatcattgctcagggtttgcccttctgtcgcagacggatgaagagaaagttg
gaccatggcccagaggtccgatctttcccttcaggaaaaaagccctgcaaaggcccagag
tatccgagcccgacaggaattgtcccctgtccagccacacccaccacatttggccacatt
aggacagccaatggtcaggggcagcagagacggcgtatcacctcaatccagccacccacg
ggtctccaagaatggctccgaacatttcagagctggactggcccagagaagctgctggcg
ctggatgagttgattgacagctgtgagcccacacaagtcaagcacatgatgcaggtgatc
gagccgcagtttcagcgagactttatctccctgctgcccaaagagctggctttgtatgtg
ctgtcattcctggaaccgaaggacctcctccaagcagcccagacttgtcgctactggcgc
atcttggcagaagacaacctgctctggagggagaaatgcagggaagaaggcatcgatgag
cctctgccccccaagaagaggaaaatcggcaagcccggcttcactcacagcccctggaag
agtgcctacatcaggcagcacagaatagacactaactggaggagaggggaccttaaatca
cccaaggtgctgaaaggtcatgacgaccacgtgatcacctgcctccagttctgtggcaac
cgcatcgtcagcggctctgacgacaacacgctgaaagtctggtcggccatcacaggaaag
tgtctgcgcacgctggtgggccacacagggggtgtgtggtcatcccagatgagagacaac
attattatcagcggctccactgatcgcacactcaaggtctggaacgcagagacaggagaa
tgtatccacaccctctatgggcatacctcaacagtgcgctgcatgcacctacatgagaaa
agggtggtcagtggctcccgtgacgccacgctgcgcgtctgggacattgagacaggtcag
tgtttacatgtcctcatgggccacgtggctgcggtgcgctgtgtccagtacgacgggcgg
cgggtggtcagcggtgcctacgacttcatggtcaaagtgtgggaccccgagacggagacc
tgcctccacacgctgcagggccacaccaacagagtgtactcattacagtttgatgggatc
cacgtggtgagcggctcattggacacgtctataagagtctgggacgtggagacgggcaac
tgcatccacacgctaacggggcatcagtccctcaccagcggcatggagctcaaagacaac
atcctggtctcaggcaacgcagactccacggtcaagatctgggacatcaagacgggccag
tgcctgcaaacactgcaaggtcctcacaagcaccagagcgccgtgacgtgcctccagttc
aacaagaactttgtcatcaccagctcggacgatggcacagttaaactgtgggacctgaag
acgggcgagttcatccgaaacctggtgactctggagagcggcggcagcggcggcgtggtg
tggcgcatccgggcctccaacaccaagctggtgtgcgcggtgggcagccgcaacggcaca
gaggagaccaagctgctggtgctggactttgacgtggacatgaagtga
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