Siniperca chuatsi (mandarin fish): 122874079
Help
Entry
122874079 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 2
KO
K10159
toll-like receptor 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04145
Phagosome
schu04620
Toll-like receptor signaling pathway
schu05132
Salmonella infection
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122874079
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122874079
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122874079
09171 Infectious disease: bacterial
05132 Salmonella infection
122874079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122874079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122874079
04054 Pattern recognition receptors [BR:
schu04054
]
122874079
04090 CD molecules [BR:
schu04090
]
122874079
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122874079
Membrane trafficking [BR:
schu04131
]
Endocytosis
Phagocytosis
Toll-like receptors
122874079
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of breast milk
122874079
Pattern recognition receptors [BR:
schu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122874079
CD molecules [BR:
schu04090
]
Proteins
122874079
Glycosaminoglycan binding proteins [BR:
schu00536
]
Hyaluronan
Cell surface receptors
122874079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
LRR_8
TIR_2
LRR_4
LRR_5
Motif
Other DBs
NCBI-GeneID:
122874079
NCBI-ProteinID:
XP_044047563
LinkDB
All DBs
Position
LG3:complement(8848254..8849801)
Genome browser
AA seq
418 aa
AA seq
DB search
MMCEGKGVFLSLKTINISRNYLQSINSQLFTKLDKLENIDMSGNMFHRMPETCYWPPSLQ
FLNLSSAHLTKVTTCLPINLHILDLSDNALTVFNIELSFLTELYISGNKLSSLPGGGLYP
GLAFLSIQNNDLHTFSSNNLNDYNNLKRLEAGANMYVCSCDFVAFMTGDSTTHRVTIGDG
FKSYICDSPDTVRGESVVDVRLTVFECHIALAFTLLCLGILGVFLLILGLCHKFSIVWYI
MMTWVWLRAKRKPKLKKGELEYDAFVSYSEMDSGWVEAHLVPELEQAEPPLQLCLHKRDF
VAGXLDNIMDAIEKSHKTLFVLSQHFVRSEWCKYELDYTHFRLFDQNDDAVVLILLEPID
KETIPKKFCKLWRVMNSRTYLEWPDDDNQIPRFWQSLRTAIKTPETENRNCLIDTVDL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgagggcaaaggtgtttttttgagtctgaaaaccatcaatatcagcaggaat
tacctgcagtcaatcaacagccagctcttcaccaaactagataagcttgaaaacattgac
atgagtggaaatatgtttcatagaatgcctgagacttgttactggccgccaagtctccaa
ttcttaaacctttcatcagcgcatttaacaaaagtgaccacttgtttgccgataaattta
cacatcctcgatctatcagacaatgccttgactgtgttcaacatcgaactatcttttctc
acagagttatacatctctggaaacaagctcagtagtttgccaggtgggggtttataccct
ggtctcgcatttctctccattcaaaacaacgacttacacacgttcagcagtaataatcta
aacgattataataatctgaagcgtctggaggctggtgctaacatgtatgtctgttcatgt
gactttgtagcgttcatgacaggtgactcgacgactcatcgcgtcacaattggagatgga
ttcaagtcgtatatctgtgactcccctgataccgtgagaggagagagtgtggtagacgtg
aggttgacagtgtttgagtgccacatagctttagcttttactttactctgcttaggcatc
ctgggagtgtttctgctcatcttaggtttgtgtcacaaattcagcattgtgtggtatatc
atgatgacctgggtctggctgagagctaagaggaagccaaagttaaaaaagggagagctc
gagtatgacgcctttgtgtcctacagtgaaatggactctggttgggtggaagcacatttg
gtcccggagctcgagcaggccgagcctcctctccaactctgcctccacaagagagacttt
gtggctggantattggacaacatcatggacgccatcgagaagagtcacaaaactctgttt
gtcctttctcagcattttgtcaggagtgaatggtgcaagtacgaactggattacacccat
tttagattgtttgaccaaaatgacgacgcagtggtgctgattctgttggagcccattgac
aaagagaccatccccaaaaagttctgtaagctgtggagagtcatgaactccaggacttac
ctggagtggcctgatgatgacaaccagatccccaggttctggcaaagcttgagaacagct
attaaaacacctgagactgagaatagaaactgtttaattgacactgtggacttataa
DBGET
integrated database retrieval system
