Siniperca chuatsi (mandarin fish): 122874601
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Entry
122874601 CDS
T08948
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122874601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122874601
Enzymes [BR:
schu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
122874601
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122874601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
122874601
NCBI-ProteinID:
XP_044048604
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All DBs
Position
LG4:complement(3652892..3659818)
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AA seq
451 aa
AA seq
DB search
MEEKLNGSFPVVSPEYLHQWVQSAQQFQALQAQYSGFNSNNQFHYPEEQTGETAMAHMAN
PESMMDQQEPANLAKPPAKKRGRQAQPKEPKAPKPPKVPKAPKPPKDPNAPKAKPGPKPK
KAAEAQADGKQEKIDESFKKVKRKVDRFKGMSEEEVMKKTLPDLLDYNLDYVIIGINPGL
MAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVARATPGSKDL
SSKELREGGTILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPKKLEFGLQPHKIPDCD
VALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGIQRSTEVEEVEYSFDLQLAKED
AKRMAIKEEQYDPGYEDAYGGAYAERGPEGGQAQSQTNGHCTFSTVENTEGAQEATTSQI
AEGQLPDGQWMTQSFADQIPDISGGPKDGSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatcattccctgttgtctccccggagtatcttcatcagtgg
gttcagtctgcacagcagtttcaagctctccaggctcaatattcaggcttcaactccaac
aatcagtttcactacccggaggagcagacgggagagacagccatggcacacatggctaat
ccagaatccatgatggatcagcaggaacctgccaacctggcaaaacccccagccaaaaag
agaggcagacaagctcaacccaaggaacccaaggcacccaaaccaccaaaagtccccaag
gcaccaaagccgcctaaggacccaaatgcacctaaagccaaacctggtcctaagcccaag
aaggccgctgaggctcaggcagatggcaagcaagagaagattgatgagagcttcaagaag
gtgaagaggaaagttgaccgcttcaaaggaatgtcagaggaggaagtcatgaaaaaaact
ctaccagacctgctggattacaacctggactatgtcattattggtatcaatccaggactg
atggcagctttcattggacggtggtttccaggtcctggaaatcatttttggaagtgccta
tttctgtcgggatttactgaggagcaactcaaccacatgcatgataccaccctgcctgtt
aagtacaaaatgggcttcaccaacatggtggccagggcgacaccagggagcaaagacctc
tcaagtaaagagttacgtgaaggaggcacaattctcgtagagaagctgaagaaatacaag
cctcttattgctgttttcaatggaaaatgcatctatgaaatgttctgcagagagttgttt
ggtaaaaaaccaaagaaacttgaatttggtttgcagccacacaagatccccgactgtgac
gtggctctgtatctgatgccttcatccagcgctcgttgtgctcagtttcctcgtgctcag
gacaaagtccacttttacatcaaactgagggagctcagagatcagctgaagggcatccaa
agaagcactgaggtcgaggaggttgagtactcatttgacctgcagttggccaaggaggat
gccaagaggatggcgataaaggaggagcagtacgatcctggttatgaagatgcctacggt
ggagcatatgcagagagaggacccgaagggggccaggcccaaagccagaccaacggtcac
tgtacattctcaactgtagaaaacacagaaggagcacaggaggcaaccacgtcacaaatc
gctgaaggccagctcccagacggacagtggatgacccagtcctttgcagatcagatccca
gacatcagcggtggaccaaaggatggcagcgtataa
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