Siniperca chuatsi (mandarin fish): 122876306
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Entry
122876306 CDS
T08948
Symbol
traf2a
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04137
Mitophagy - animal
schu04141
Protein processing in endoplasmic reticulum
schu04210
Apoptosis
schu04217
Necroptosis
schu04621
NOD-like receptor signaling pathway
schu04622
RIG-I-like receptor signaling pathway
schu04920
Adipocytokine signaling pathway
schu05132
Salmonella infection
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122876306 (traf2a)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122876306 (traf2a)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122876306 (traf2a)
09143 Cell growth and death
04210 Apoptosis
122876306 (traf2a)
04217 Necroptosis
122876306 (traf2a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122876306 (traf2a)
04622 RIG-I-like receptor signaling pathway
122876306 (traf2a)
09152 Endocrine system
04920 Adipocytokine signaling pathway
122876306 (traf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122876306 (traf2a)
09171 Infectious disease: bacterial
05132 Salmonella infection
122876306 (traf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122876306 (traf2a)
04121 Ubiquitin system [BR:
schu04121
]
122876306 (traf2a)
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122876306 (traf2a)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122876306 (traf2a)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122876306 (traf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
Sina_ZnF
zf-RING_5
zf-C3HC4_4
zf-RING_6
MATH
TRAFD1-XIAF1_ZnF
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
122876306
NCBI-ProteinID:
XP_044052387
LinkDB
All DBs
Position
LG5:6730409..6751797
Genome browser
AA seq
568 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANNHEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNK
IVSSGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEASHEGNCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLDVASHKLQELHQSLRDLELKMSQLGGGGAAPVQG
ACAPTLATSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVSTFENIVCVLNREM
ERSCTTMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMDGKMREMSAATYDGI
FVWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggagccgtctccaccatcttccctggaaggcaacaaaccgggcttccca
aagaaaattttggccaacaaccacgaagacaagcatttgtgcaattcatgtcagaaaatc
ttgagaaggcctttgcaagctcaatgtggtcatcgcttttgttcgttctgtttcaacaaa
attgtgagttctggaccacagaaatgcagtgcttgcatcaaagaagacttgtttgaggaa
cccacctccattctcaagcaaggtggtgctttccctgataatgcagctcggagagaagtg
gaggccttggcagctgtctgtcccaatgaaggatgcacgtggacgggaactatcaaagaa
tttgaggccagccatgagggcaactgtgacttcatgatcatcctgtgtccttcctgtaaa
gagctgatgagagccaatgaacaggagcgccacaacgagagagaatgtccagagaggacg
ctcaactgcaaatactgcaaagaacccttcctgttaaagaacatcaaggctcatgatgag
atctgtccaaagtacccgatgatttgtgaaggttgtgcaaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaaatttaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaagatccatgaccacgagcggcagtgttcg
tatgaacacctcaacctactcctgcatttcatcatgggcatcaaggtgagtttggagagc
ctgcagccccagagcctggatgtggccagccacaagctgcaggagctccaccagtccctc
agggacctggagctgaagatgagccagctggggggtggtggtgcagctcccgtgcagggt
gcatgcgccccgaccctggccacctccttcacaccgctgcccagtgccatgggcgctgcc
ctggagctgcagctccagagtgaaaaaaccaaggtggccgagctgagccggcgttgccag
gagctggagctcaaagtgagcacgttcgagaacatcgtctgcgtcctcaaccgagagatg
gagcgctcctgcaccaccatggaggcctacaaccgtcaacaccgactggatcaggacaag
attgagatcctcagcaacaaggttcgtcagctagagaggacggtgagtctgagggatctg
tccatcgtggagatggatgggaaaatgagggagatgtctgcagccacatacgacggcatc
tttgtctggaagatctcggatttcaccaagaagaggcaggacgctgtagccggccgtgcc
cctgctatgttctctcctgccttttataccagtaaatacggctataagatgtgcctgcgg
atctacctgaatggggacgggacgggccgcggcacccacttgtctctgttctttgtggtg
atgagaggacacagcgacgcgctcctgaaatggccttttaatcagaaggtcaccctaatg
ctgctcgaccagaacaacagggagcacatcatcgatgccttccggcccgacatctcctcc
tcatctttccagaggcccgtcagcgatatgaacatcgccagcggctgcccactcttctgt
ccgctctccaagctggactctaaaaactcctacatacgcgacgacaccatcttcatcaag
gctattgtagacctcactgggctctag
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