Siniperca chuatsi (mandarin fish): 122876781
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Entry
122876781 CDS
T08948
Name
(RefSeq) actin, cytoplasmic
KO
K05692
actin beta/gamma 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
schu04145
Phagosome
schu04210
Apoptosis
schu04510
Focal adhesion
schu04520
Adherens junction
schu04530
Tight junction
schu04810
Regulation of actin cytoskeleton
schu04814
Motor proteins
schu04820
Cytoskeleton in muscle cells
schu05100
Bacterial invasion of epithelial cells
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122876781
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122876781
09143 Cell growth and death
04210 Apoptosis
122876781
09144 Cellular community - eukaryotes
04510 Focal adhesion
122876781
04520 Adherens junction
122876781
04530 Tight junction
122876781
09142 Cell motility
04814 Motor proteins
122876781
04820 Cytoskeleton in muscle cells
122876781
04810 Regulation of actin cytoskeleton
122876781
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122876781
05100 Bacterial invasion of epithelial cells
122876781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122876781
03019 Messenger RNA biogenesis [BR:
schu03019
]
122876781
03036 Chromosome and associated proteins [BR:
schu03036
]
122876781
03029 Mitochondrial biogenesis [BR:
schu03029
]
122876781
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122876781
04147 Exosome [BR:
schu04147
]
122876781
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122876781
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
122876781
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
122876781
NuA4 complex
122876781
Chromatin remodeling factors
BAF complex
122876781
PBAF complex
122876781
GBAF(ncBAF) complex
122876781
SWR1 complex
122876781
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
122876781
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
122876781
Exosome [BR:
schu04147
]
Exosomal proteins
Proteins found in most exosomes
122876781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
DUF6581
Motif
Other DBs
NCBI-GeneID:
122876781
NCBI-ProteinID:
XP_044053449
LinkDB
All DBs
Position
LG5:1701289..1706859
Genome browser
AA seq
375 aa
AA seq
DB search
MEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNCPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASSSSSLEKSY
ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPAIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacgtcgctgccctcgttgttgacaacggctccggcatgtgcaaggccggt
tttgccggagacgacgccccccgcgccgtcttcccgtccatcgtcggccgccccagacac
cagggtgtgatggtggggatgggacagaaggacagctacgtgggagacgaggcccagagc
aagagaggcatcctgaccctgaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatttggcatcacaccttctacaacgagctgcgtgtcgctcctgaggag
catccagtcctgctgaccgaggcgccgctcaaccccaaggccaacagggagaagatgacg
cagatcatgttcgagaccttcaactgtcctgccatgtatgttgccatccaggccgtcctg
tcgctgtacgcctccggtcgtaccacaggtattgtgatggactccggtgacggtgtcagc
cacactgtgcccatctacgagggttacgctttgccccacgccatcctccgtctggacctg
gctggcagagatctgaccgactatctaatgaagatcctcactgagaggggctacagcttc
accaccaccgccgagcgtgagatcgtgcgcgacattaaggagaagctctgctacgtggct
ctggacttcgagcaggagatgcagacggcatcttcatcctcctccctggagaagagctac
gagcttcctgacggacaggtcatcaccatcggcaacgagaggttccgctgccccgagacg
ctcttccagccttcgttcatcggaatggagtcggctggcatccacgagacgacgtacaac
agcatcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacacggtgctgtcc
ggcggcaccaccatgtaccccggcatcgctgaccgtatgcagaaggagatcaccgccctg
gccccacccaccatgaaaatcaagatcatcgctcccccagagaggaagtactcagtctgg
atcggcggctccatcctggcctccctctccactttccagcagatgtggatcagcaagcag
gagtacgacgagtccggccccgccatcgtccaccgcaagtgcttctag
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