Siniperca chuatsi (mandarin fish): 122876825
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Entry
122876825 CDS
T08948
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122876825 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122876825 (prdm6)
03036 Chromosome and associated proteins [BR:
schu03036
]
122876825 (prdm6)
Enzymes [BR:
schu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
122876825 (prdm6)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122876825 (prdm6)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122876825 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
SET
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
Zap1_zf1
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
122876825
NCBI-ProteinID:
XP_044053519
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All DBs
Position
LG5:2176502..2287282
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AA seq
646 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPPPPPPDRLSIPMESLRPSRLHS
HLLASTHCTSSSSSTSSSSASSSAAAVAAALTPSSSISISTSAGLSQLPVPQQIALFGQA
LAPVCAGPGGPGGGGGGGPGGGGGGGGDLMVVVPPENQQGHNPAAGLLHQAKEQSCGGVG
VVSSSVKSSGSGGGGEEAGKGATGRFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCD
MCADNRNGECPMHGPLHSLRRLVGTSSTAAPVALPDVPDWLRDLPREVCLCTSTVPGLGY
GICAAQRIPQGTWIGPFQGVPLLLDKLQSGAVRNTRHLWEIYDAEGTLQHFIDGNDPSKS
SWMRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIA
QDENLNVPATVVEAMTRQESLQSFSKNSKPSSSSSSTPSTALMRSMVFPHSPCPRNFSLL
DKVGVGVQSDSSFSQLGSKNQRILASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILLQM
HVCPQNPDRPYQCGHCSQSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRT
HTGEKPFNDAKGGRDQSKQTENAQRATTRTSEDDARVLRHKMNKIK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccaggcgacccgagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggctcctctggccccgccgccg
cctccacctgaccgcctctccatccccatggagagcctgcgcccgtcccgcctgcacagc
cacctcctggcctccacacactgcacctcctcttcttcttccacatcctcctcctcagct
tcttcttcagcagcggcggtagcagcagctctcaccccatcctcctccatctccatctcc
acctcggcaggactctcccagctgcccgtgccccagcagatcgcactcttcgggcaggcg
ttggccccggtgtgcgccgggcctggaggacctggaggaggaggaggaggagggccagga
ggaggaggaggaggaggaggagacctgatggtggtcgtccctccagagaaccagcaaggt
cacaacccagcagcggggcttctccatcaggccaaagagcagagctgcgggggggtcggc
gtggtgtcgtccagtgtgaagagcagcggcagcggaggaggcggagaggaggccggcaaa
ggagcgacgggcaggttcaagctgacgtcggaggagctggactactacctgtacggacag
cagaggatggagatcatcccactgagcaaccacacaggagaggtcaacaaccgctgtgac
atgtgtgcagacaacaggaacggcgagtgtccgatgcacggccctcttcactctctgcgg
cgactcgtcggcaccagcagtacggcggctcccgtcgccctgccggacgtccctgattgg
ctcagagacctgcccagagaggtgtgtctgtgcaccagtacagttcctggtctgggttat
gggatctgtgcggctcagaggatccctcagggaacctggatcggcccatttcagggagtc
cctctgctgctggacaaactgcagtctggagccgtcagaaacaccagacacctgtgggag
atctatgatgcagaggggacgttacagcactttattgatggtaatgatcccagtaagtcg
agctggatgaggtatatccgctgtgcccgacactgtggggagcagaacatgatggttgta
cagtacaggtcctgtatcttctacagagcatgtatggatatccccagaggaacagagctg
ctggtttggtacaatgactcctacacttccttcttcggcatcccgctgcagtgcatcgct
caggacgaaaacttaaatgtcccagccacggtggtggaagccatgaccaggcaggagtcc
ctccaatccttcagcaagaacagcaaaccctcctcttcctcctcttccaccccctccacc
gccctcatgcgctccatggtcttcccccactccccctgccctaggaatttctcccttttg
gacaaggttggggtcggggttcagtcggactccagtttcagccagttggggtcaaagaac
cagcgaatcctggcgagcccaacctccacgagccagctgagcagtgatttcagcgactgg
cacctgtggaagtgtggccagtgcttcaagaccttcactcagaggatcctgctgcagatg
cacgtctgtccgcagaatcctgacagaccataccagtgtggccactgctcccagtccttc
tctcagccatcagatttgaggaaccacgtggtgacgcactcaagcgaccgacccttcaaa
tgtggatactgcggtcgtgcgttcgctggtgccacaacactcaacaaccacatccgcact
cacactggggagaagccgttcaatgatgccaaaggagggcgcgaccaaagcaaacagact
gagaatgcacaacgagcaacaacacgaacgtctgaggatgacgctcgagttttacgtcac
aaaatgaacaaaataaaatga
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