Siniperca chuatsi (mandarin fish): 122877488
Help
Entry
122877488 CDS
T08948
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122877488 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122877488 (mmp2)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
122877488 (mmp2)
Peptidases and inhibitors [BR:
schu01002
]
Metallo peptidases
Family M10
122877488 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
122877488
NCBI-ProteinID:
XP_044055035
LinkDB
All DBs
Position
LG1:complement(26030876..26046161)
Genome browser
AA seq
658 aa
AA seq
DB search
MGFPTIFSCRRIVLKVFLVQFIAFQATYAAPSPIIRFPGDDINPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPMW
QKKDITYRILGYTPDLDEEVINDAFFRAFKVWSDVTPLSFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKFGNADGEFCKFPFLF
MGTEYNSCTSQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNAEGAPCKFPFTFQG
EKYDGCTTQGRDDGYRWCATTEDYDRDTSYGFCPETAMSTVGGNAEGSPCVFPFTFLGDT
YDSCTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKDFRLSQDDIKGIQELYGVPTDKPLPPTQGPVTPMDICKEPVIFDAVAQIR
GETFFFKDRFLFRSVNFRSKPNGPMLVATYWPDLPVKIDAAYENPVEEKTVFFSGNEMWV
YKADELEKGYPKRLSSLELPTDLQQIDAAFNFRKNRKTYLFSGDKFWRYDEDKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYSYFFKGNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatttagctgtcgtcggattgttctcaaagtgtttttggttcag
ttcatcgcctttcaagcaacatatgctgccccttcgcctattattaggtttcctggagac
gatattaaccccaaaacagacaaagaagttgctctgcactatctgaataagttttacgga
tgcccacaagacagatgcaaccttatggtgctcaaggacaccctgaagaaaatgcagaag
ttcttctctctgcaagaaactggagagattgatgccaaaactgtggatatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaattacaacttcttccacaggaaacccatgtgg
cagaagaaagacatcacttacagaatcctcggatacactcccgatctggacgaggaagtc
ataaatgatgctttcttcagagccttcaaagtatggagtgacgtcaccccactctcattc
acccgcctcatggatggagaggctgacatcatgattaattttggccgcaatgagcacgga
gatggttaccccttcgacggcaaagatggcctcttggctcatgcctttgctccagggcca
ggaattgggggagactcccattttgatgatgatgagcagtggacgctgggagacggccaa
gtggtgaaggtgaagtttggcaatgctgatggagagttctgtaaattccccttcctgttc
atgggcactgagtacaacagctgtacatctcagggccgtgatgatggcttcctgtggtgc
tcaaccacttacaactttgatgaagacggaaaatatggcttctgcccccatgaattacta
ttcaccctgggtggaaacgcagagggcgctccatgtaaattccccttcacctttcaggga
gagaagtatgacggatgcaccacccaaggcagggatgatggttaccgctggtgtgccacc
actgaggactatgaccgtgacacatcctacggattctgccctgaaactgccatgtcaaca
gtgggaggaaacgccgagggaagcccctgtgtcttccccttcacctttttgggtgacacc
tatgactcctgcacctcatctggacgcagcgatggcaagatgtggtgcgcttccaccaag
agctatgatgatgaccgcaaatggggtttctgtcctgaccaaggctacagtttgttcctg
gtggcagcccatgagtttggtcatgccctcggcttggagcactctcaggaccccggagca
ttgatggcccccatttacacttacactaaagacttcagactttctcaggatgacatcaaa
ggcatacaggagctctacggtgtgccgacagacaagcctttgcctccaactcagggtcca
gtcactccaatggacatctgtaaagagccagttatctttgatgctgtagcacagatcaga
ggagagaccttcttcttcaaggacaggttcctgttcaggtcagtcaacttcagaagcaag
cccaacggccctatgctagtggccacctactggccagacctgcctgtcaagattgatgct
gcctatgaaaacccagtggaggaaaaaacagtgttcttctcaggcaacgagatgtgggtc
tacaaagcagatgagttggagaaaggctatcccaagaggctctccagccttgagctcccc
actgacctgcagcaaatcgatgctgccttcaactttaggaagaacaggaagacttacctg
ttttctggggacaaattctggagatacgatgaagataagaagaaaatggaccctggcttc
cccaaacttattgctgattcctggaacggcatcccagatggcatagactctgccttcagt
cttaatggcattgattacagctacttcttcaaaggtaaccactatttcaaactggaagac
agcagcttgaagattgttaagttgggtgaaatcacaaaggactggcttggttgttga
DBGET
integrated database retrieval system
