Siniperca chuatsi (mandarin fish): 122878208
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Entry
122878208 CDS
T08948
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
schu04520
Adherens junction
schu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122878208 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122878208 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
122878208 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122878208 (ptprfa)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
122878208 (ptprfa)
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
122878208 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
PTP-SAK
Fn3_VIN3
Interfer-bind
Tc-R-P
V-set
DSPc
Y_phosphatase3
C2-set_2
Ig_C17orf99
PTP-NADK
Fn3_PTPRU
PTPlike_phytase
Fn3_ELFN
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
122878208
NCBI-ProteinID:
XP_044056642
LinkDB
All DBs
Position
LG6:complement(31297535..31735391)
Genome browser
AA seq
1925 aa
AA seq
DB search
MDLRLRRLSPLTRGALHLLLLAGLVLPSHAESMPSFIKSPEDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIYWFKDFLPVDISS
SNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQREVRR
VPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMTGEVELTREEEMPIGRNVLELTN
IRQSANYTCVAISSLGMIETTAQITVKALPKQPTSLIVTETTATSVTLTWDSGNPEPVSY
YVIQYRAKLSDNGFQEVDGVATTRYSIGGLSPFSEYEFRVMAVNNVGRGPPSGIVDTRTS
EQAPSSPPLHVQARMLSSSTMLVQWEPPEEPNGQIRGYRVYYSSKHDAPLSAWQKHNTDD
SQLTTISGLTTDITYSLKVLGFTSVGDGPPSDVLQIKTQQGVPAQPSGFEAEAELDSRIM
LSWLWPVQDPIISFELLYWEASNPTDKHRVIFDPAGSYAVDSLKPDTLYMFSLAARSDMG
LGVFTQPIETRTAQSTPSAPPQEVHLLSLSSTSIKVSWVAPPTDSHHGEIVGYSLAYQAL
TGDDVERHQVSGIGADVTSYVLEDLEKWTEYLAWVRAHTDVGPGPESPTARIRTKEDVPG
APPRKVEADALNSTALRVTWKSPLSVKQHGQIRGYQLVYSRLENGEPHGQPVIMDVSLPE
AQEAIITGLLPETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMISTTIGNTALI
QWQPPKEMVGEHVGYQLQYKRAEEEAFIIKDFRQTDDHFTVTGLHKGATYIFKLCAKNRA
GNGEEYVKEISTPEDIPSSYPQNLSVEGLTATSTKLAWDPPPLTERNGKIVKYVVVYRDI
NSQHNNTNSTTETQMTVQGLQPDTTYDIRVQAFTNKGGGPISPSIQSRTMSTSMSDLPSV
FTKNFGVKAVMKTSVLLTWEVPETYKSQVPLKILYNQQSVEVQGNLKRKLITQLQPDTDY
SFVLMSRGNSAGGLQQQVSIRTAPDLLKMKPARYQHDVEEGGKVTISLPRVPAGAPVRWY
YIVVVPVTPASLRRWENPENMDVHELLEAGADSSLQRKKRQSQDFLQPYIAAKLDALPEI
FTLGDEKKYNGYYNKPLPGQQQYRCFVLADLTDHESQRTFAASPFSEPIVVKLHSGMTRQ
TEDPEMLWVMGPVLAVILIIIIVIAILLFKSKQERKRTSPAKDEHMAGVKDSLLAHSSDP
VEMRRLNYQTQGSSALSCPNTPRMREHPPIAICDLADHIERLKANDGLRFSQEYESIDPG
QQFTWEHSNLEVNKPKNRYANVIAYDQSRVILTPVDGVPGSDYINANYIDGYRKQNAYIA
TQGALRETVCDFWRMVWEQRTCTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDT
VELATYSVRTLALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPTLAFLRRVKTCNPPDAG
PMVVHCSAGVGRTGCFIAIEAMLERMKHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHE
ALLEAATCGNTEVPARNLYAHIQKLTQIPAGETVTAMELEFKKLANSKAHTSRFISANLP
CNKFKNRLVNILPFESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYMATQGPLAETTED
FWRMLWEHNSTIVVMLSKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREF
KVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAG
VGRAGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSF
DHYAT
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagactcagacggctgtcgcctctcaccaggggagctcttcatctcctgctg
ctggccggactggtgctgccttctcacgcagagagcatgcccagcttcatcaagtcccct
gaggatcagacagggatttcgggaggagtggcgtcgttcgtatgccaggcggtgggtgag
cccaaacctcgcatcacctggatgaagaagggaaaaaaagtcagctctcagcgctttgag
gtgattgagtttgatgacggctcaggctcggtgctgcgaatccagcctttgaggacccac
cgcgacgaagccatctatgaatgcacagccaccaacagtgtgggagagatcaacaccagt
gccaagctcactgtcttagaggaggaccagatccctcatggtttccccaccatagacatg
gggccccagctgaaggttgtggagagaacgcgtactgctacgatgctgtgtgcagccagc
ggcaaccctgacccagagatctactggttcaaagacttcctacctgtggacatcagcagc
agcaacgggcgcataaaacagctgcggtcaggtggtacaccaatcagaggagcgcttcag
attgagaacagcgaggagtcggaccagggcaagtacgagtgcgtggcagtcaacagcgcc
gggactcgctactcggctccagctaacctttatgttcgagatcaacgggaagttcgtcgt
gtgcctccccgtttctccatcccccccaccaatcatgaggtgatgcccggcggcagcgtc
aacctgacctgcgttgcggttggtgctcccatgccttatgtcaagtggatgaccggcgag
gtggagctgacccgggaggaggagatgcctattggccgcaacgtcctagagctcactaac
atccggcagtctgccaactacacctgtgtggccatatcctccctgggcatgattgagacc
acggcccagatcactgtcaaagccctgcccaagcagcccacctccctcattgtgacagaa
accacggccaccagtgtcaccctgacctgggactctggcaacccagaaccggtgtcctac
tatgtgatccagtaccgcgctaaactgtctgacaacggcttccaggaagtagacggagta
gccacaacccgatacagcatcggcggcctcagccccttctctgaatatgagtttcgtgtc
atggctgtcaacaacgtcggccgggggcctccaagcggtattgtggacacccgtacaagc
gagcaagcaccgtcatcacctcctcttcacgtccaggcgcgcatgctgagctccagcacc
atgctcgtccagtgggagcctccagaggagcccaatggccaaatccggggataccgagtc
tactacagctccaagcacgatgccccactcagtgcctggcagaaacacaacacagatgac
agccagctcaccaccatctcaggcctcaccacagatatcacctacagcctgaaggtgctg
ggcttcacctctgtgggagacgggcctccctctgatgttctgcagatcaagacccagcag
ggagttccagctcagccgtctggttttgaggcagaggccgagctagactcacgcatcatg
ttatcatggctttggcctgtccaggaccccatcattagctttgaactgctctactgggag
gccagcaatcccacagacaagcatcgtgtcattttcgacccagcaggctcctatgcagtt
gatagtctaaagccagatacactctacatgttttccctggcagcaagatctgacatgggt
ttaggagtctttactcagcctattgagaccaggactgcccaatcaaccccttcagcccct
ccccaggaggtgcacttgctcagcctcagctccaccagcatcaaggtgagttgggtggcg
ccgcccacagacagccaccatggggagatagtgggctactccctagcctaccaagcactc
acaggggacgatgtggagcgccaccaggtgtcagggattggcgctgatgtcaccagctat
gtgctggaggacctggagaagtggactgagtatttggcgtgggtgagggctcatactgac
gtcgggcctggcccagagagccccacagcccgcataagaaccaaggaagatgtgcctgga
gctcctccaaggaaggtagaggcagacgcccttaactccactgccctcagggtgacctgg
aagtctcccctgtctgtgaagcagcatggccagatcagaggctaccagctggtctactcc
aggctagagaacggggagcctcatggccaaccggtcatcatggatgtttccctccctgaa
gcccaggaggccattataacaggtctgctcccagagactacctactctgtgactgtggct
gcgtataccaccaagggcgatggagctcgcagcaaagccaaggtggtcaccaccacagga
gcagtgcctggtaagcccactatgatgatcagcaccaccatagggaacactgccctgatc
cagtggcagccccctaaggagatggtgggagagcatgtaggataccagctgcagtacaag
agagcagaggaggaagctttcattatcaaagacttcagacagacagatgatcatttcaca
gtcactggcctccacaagggagccacctacatcttcaaactgtgcgccaaaaaccgagca
ggcaacggagaggagtatgtgaaggagatcagcactcctgaagacattcccagtagctac
ccccagaatctgagtgtggaaggcctgaccgccacctccaccaagctggcctgggacccc
ccccctctgaccgagaggaacgggaagattgtaaagtacgtggtggtgtatcgagatatc
aatagccagcacaacaacaccaatagtaccacagaaacacagatgaccgtccaaggtttg
caacctgacacaacctacgacatcagggtccaagctttcaccaacaaagggggaggacca
atcagccccagcattcaaagcagaaccatgtccacctccatgtcagaccttccctcagtg
ttcaccaagaactttggtgtgaaggctgtgatgaaaacctctgtcctgctgacctgggaa
gtgccagaaacctacaaatctcaagtgcctctcaagatcctgtacaaccagcagagtgtg
gaggttcaaggcaacctgaagaggaagttgatcacacagctgcagccagatactgattat
tcctttgtgctaatgagccgggggaacagtgccggtggcctccagcagcaggtttccatc
cgaacagctccagacttgctgaagatgaaaccagctcgataccaacacgatgtggaggag
ggtggtaaagtgaccatcagtctgcccagggtccctgctggagcccccgtcagatggtac
tacatagtggttgtccctgtcactccagcttctctgagaagatgggagaaccctgaaaac
atggacgtacatgagctcctggaagctggtgctgacagcagtctgcagagaaagaagaga
cagagccaggatttcctgcagccctacatcgctgccaagttggacgctctgcctgagatc
ttcactctgggggatgagaagaaatacaatggctactacaacaaacccctccctggccag
cagcagtatcgctgctttgttctggctgacctgacggatcacgagtctcagaggacgttt
gcggccagcccgttctctgagcccatcgtggtgaagctccacagtgggatgacccgacaa
actgaggacccagagatgctgtgggttatgggtccagtgctggctgtcattctcatcatc
atcatagttattgctattctactctttaagagcaaacaagaaaggaaacgaacatctcca
gccaaggacgagcacatggcgggtgtcaaggactcactgctggcccactcctcagaccct
gtggagatgaggagactcaactatcagacacaaggttccagtgccctcagttgcccaaac
actccaaggatgagggaacatcctcccattgctatctgtgacctggcagaccatatagag
agactcaaggccaatgacggtctgcgcttctctcaggaatacgagtctattgatccagga
cagcagttcacctgggagcactctaacctggaggtcaacaagccaaaaaaccgctatgca
aatgttattgcctacgaccagtccagggtcatcctcacacctgtggatggagttccaggg
agcgactacatcaacgccaactacattgacggctacaggaagcagaatgcttacattgcc
acacagggggcgctgcgggagacggtgtgtgacttctggaggatggtgtgggagcagagg
acctgcaccatcgttatgatgacccgcctagaggagaagtcacgggtgaagtgtgaccag
tattggccaagtcgaggcacagagacatatgggatgattcaggtgaccatgctggacact
gtggagctggctacgtacagcgtacgcacattagccctctataagaatggctcaagtgag
aagagagaggttcgacagttccagtttatggcctggcctgaccatggagtgcctgagtat
cccaccccaacactggcctttctacgcagagtcaagacctgtaatccaccagacgctgga
cccatggtggtccactgcagtgctggtgtgggccggacaggctgcttcatcgcgatcgaa
gccatgctggagaggatgaaacacgagaagtcagtggacatttacggtcatgtgacgtgt
atgcgagctcagaggaactacatggtgcagacagaggatcagtacatattcatccatgag
gccctgctggaagctgcaacatgtggcaacacagaagtccctgcccgaaacctgtatgcc
cacatccagaagctcacccagatccctgctggagagactgtcaccgccatggaactggag
tttaagaaactggccaactctaaagcacatacctcaagattcatcagtgccaacttgccg
tgtaacaaattcaagaaccgcctggtgaacatcttgcctttcgagtccacccgagtctgc
ctgcagccaatcagaggggtggagggctccgactacatcaacgccagcttcatcgacgga
tacaggcagcagaaagcatacatggccacgcagggcccgttagctgagaccacagaggac
ttctggagaatgctgtgggaacacaactccaccattgtagtcatgctcagcaaactccgc
gagatgggacgggaaaagtgccatcagtactggcctgccgagcgctctgcacgctaccag
tactttgttgtggaccctatggctgagtacaacatgcctcagtacatcctgagagagttc
aaagtgacagatgccagggatggtcagtcaaggaccatcaggcagtttcagttcactgac
tggccagagcaaggagtgccaaaaactggggagggattcatcgacttcatcggccaagtc
cataaaactaaggagcaatttggacaagatggaccaatcactgtgcactgcagtgctggt
gttgggcgggctggtgtgttcatcaccctgagcattgtcctggagaggatgaggtacgag
ggcgtggtcgacctcttccagaccgtcaagacgctccgaactcagaggccagccatggtg
cagacagaggaccagtaccaactgtgctaccgggctgctctggagtacctgggaagcttt
gatcactatgcaacataa
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integrated database retrieval system
