Siniperca chuatsi (mandarin fish): 122880178
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Entry
122880178 CDS
T08948
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04137
Mitophagy - animal
schu04140
Autophagy - animal
schu04217
Necroptosis
schu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122880178 (sqstm1)
04137 Mitophagy - animal
122880178 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
122880178 (sqstm1)
04218 Cellular senescence
122880178 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122880178 (sqstm1)
03029 Mitochondrial biogenesis [BR:
schu03029
]
122880178 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122880178 (sqstm1)
Membrane trafficking [BR:
schu04131
]
Autophagy
Mitophagy
Cargo receptors
122880178 (sqstm1)
Pexophagy
122880178 (sqstm1)
Aggrephagy
122880178 (sqstm1)
Xenophagy
122880178 (sqstm1)
ER-phagy
ER-phagy recepters
122880178 (sqstm1)
Other autophagy associated proteins
Midbophagy
122880178 (sqstm1)
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
122880178 (sqstm1)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122880178 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Gp44-like_2nd
Motif
Other DBs
NCBI-GeneID:
122880178
NCBI-ProteinID:
XP_044060967
LinkDB
All DBs
Position
LG8:72329..77468
Genome browser
AA seq
525 aa
AA seq
DB search
MNFIPVKPDWSGDSEGKSPHWKVQSFLGLSLAVWAGLRQRTNGRPRQYLLLLTTVTFITE
VNIKEAERIKSCVTKFLTLFQSVEVLKCVFSVRSLVQFRVCSVPGNWSRMSVTVKAYLLG
KDESVKEVRRFAVDQDVSSSFEYLSRKTAGVFNNLKSNGFNMYYRDEDGDLVAFSSDDEL
MMGLACMKDATFRLFIKEKKEHRQNFPLHAFPPFTFGHPPPPPPGAPLAPPPALHPNVTC
DGCNGPVVGTRFKCSVCPNYDLCSACQARGTHTEHALLPIWHPLQWFPRGKWMKRMKHCM
WNQNHAQNLNVNQDQDQERPESSKPAADCSAPSASQANVDYLKNIGEEVAAMLSPLGIDV
DIDVEHEGQRTKVTPPSQSAGVERNMETDGGISEGGASEGSKVSSSSSEEETVQVCRDSD
EEWTHLNPREVDPSTGELQSLQPGNQDQDPPSGQQGPTGLREAALYPHLPQEADPRLVES
LSLMLSMGFTDEGGWLTRLLQAKNFDIGAALDAIQYAKQPHPHQP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaactttattccggttaaacctgattggtcaggtgactcagaggggaaatcccctcat
tggaaagtgcagtcattcctcggactctcattggccgtctgggcgggactccgccagcgg
accaatgggaggccgcgtcaatatttacttctcctgacgacagtgacgtttatcacggaa
gtaaacataaaggaggcagagaggattaaaagctgcgtcacaaagtttctcactttgttt
cagagtgtagaagtcttaaagtgtgtgttttctgtccggagtctggttcagttcagagtc
tgcagtgttcccggtaactggagcaggatgtcggtgacggtgaaggcctacctgttgggg
aaggacgagtctgtgaaagaggtccggaggttcgccgtggatcaggacgtgtcctccagc
ttcgagtatctgagcaggaaaacagcgggagtgttcaataatctgaagagcaacggcttc
aacatgtactacagagatgaagatggagacctggtggcgttttcctctgatgatgagctg
atgatgggtctggcctgcatgaaggacgccaccttccgccttttcatcaaagagaagaag
gagcaccgtcaaaactttcctcttcacgccttccctcccttcaccttcggccatcctcct
cctcctccacctggagctcctctggccccaccccctgccctgcaccctaacgtcacctgt
gacggctgcaacggccccgtggtgggaacccgcttcaagtgttcggtttgtccgaactac
gacctgtgctccgcctgccaggctcgagggacgcacactgagcacgctctgctgcccatc
tggcacccgctgcagtggtttcctcgggggaagtggatgaagaggatgaaacactgcatg
tggaaccagaaccatgctcagaacctgaacgtgaaccaggatcaggatcaggaacggcct
gaatcctccaaacctgctgctgactgcagcgccccctctgcctctcaggccaacgtggac
tacctgaaaaacatcggagaggaggtggcggccatgttgagcccactgggtatcgacgtg
gacatcgatgtggagcacgagggccagaggacgaaggtgacccctccctctcagagtgcg
ggggtggagagaaacatggagacggacggaggtatcagtgagggtggagccagcgagggg
tcaaaggtcagttcgtcatcgtcagaagaagaaaccgttcaggtatgcagagactctgat
gaggagtggactcacctgaaccccagagaggtcgacccctccaccggagagctgcagtcc
ctccagcccgggaaccaggaccaggaccccccgtcgggacagcaggggccaacaggtctg
agggaagcagctctttaccctcacctgcctcaagaggcggacccccgcctggtggagtct
ctgtctctcatgctgtcgatgggtttcaccgatgaaggcggctggttgactcgtctcctt
caggccaaaaacttcgacatcggcgccgcgcttgacgccatccagtatgccaaacaaccc
cacccacaccagccctga
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