Siniperca chuatsi (mandarin fish): 122880699
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Entry
122880699 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04120
Ubiquitin mediated proteolysis
schu04210
Apoptosis
schu04217
Necroptosis
schu04510
Focal adhesion
schu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122880699
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122880699
04217 Necroptosis
122880699
09144 Cellular community - eukaryotes
04510 Focal adhesion
122880699
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122880699
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122880699
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122880699
03029 Mitochondrial biogenesis [BR:
schu03029
]
122880699
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122880699
Peptidases and inhibitors [BR:
schu01002
]
Peptidase inhibitors
Family I32: IAP family
122880699
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122880699
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122880699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122880699
NCBI-ProteinID:
XP_044062009
LinkDB
All DBs
Position
LG8:21792192..21797726
Genome browser
AA seq
477 aa
AA seq
DB search
MCDHSDLETDHSDDFSMMNSRLDSFRGSSLTQRVSAERLARAGFYFTGHADRVRCFSCRK
TVENWCRGDTPVERHKEVSPACRFLSCTHRTICNPSSDTTLTNGSTYNEEAEDMEYRLRT
GEVVDETTYPMAPHMRNEEARLQTFSSWPSTAPVRPRDLAQAGLYYSRESDRVQCFCCGG
MLGGWEAGDTAWGEHAKHFPYCFFILGHDVGNIPFQGGIEEEECGSRRHANTHLCMGSFE
ERLGSFAGVQHPIDHERLARAGFYSTGNGDQVLCFRCDGGLKGWQPEEDPWEEHAKHYPG
CSFLLAEKGQEFVSNIQLQDPRRSGAVSIQCFYMHLSTQTSSHQNGFSGHRNEVLRSAMA
QKAISMGLEPSVVEKTTLEKISRTGSGYSSLEALVEDCLNNTPESDAVKTPEQDEDPLEK
LRKLQREKQCKICMDRDICIVFIPCGHLVTCKECSESLIKCPICCGAITQKLKTYIA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatcacagcgatttggagacagaccactcagatgatttttccatgatgaacagt
cgcctggactcattccgtggctccagcctgacccagcgggtgtcagcagaaagactggcc
cgggccggcttctacttcactggccatgctgatcgtgtccgctgtttcagctgccgaaaa
actgtggaaaactggtgcaggggagatacacctgtagagaggcataaggaggtttcccct
gcatgcaggtttctcagctgcacccaccgtaccatttgtaacccgagttctgataccaca
ctgactaacggttccacctacaatgaagaagcagaggacatggaatatcgtttgagaaca
ggagaggtggttgatgagaccacctacccaatggcccctcacatgaggaatgaggaggcc
cggcttcagaccttctcatcctggccctctactgctcctgtgagaccccgagatctggcc
caagccggcctctactactcacgggagagcgaccgggtgcagtgtttctgctgtggtggc
atgctgggtggctgggaagcaggggacaccgcctggggagaacatgccaaacatttcccc
tactgcttcttcatccttgggcacgatgtgggcaacatcccattccaggggggtatagag
gaagaggagtgcggcagtagacgacatgcaaacactcacctctgtatggggagttttgag
gagaggcttggtagctttgcgggtgtccaacaccctatagaccacgagaggcttgccaga
gctggcttctacagcacagggaacggagaccaggtgttgtgtttccgctgtgatgggggt
ttgaaaggctggcagcctgaggaagatccttgggaagaacatgccaaacactaccctgga
tgcagcttcctgttagcagaaaaaggacaagaatttgtcagcaacatccagctacaagac
ccacgacgaagtggagctgtaagcattcagtgcttttacatgcacttaagtacccagact
tcaagtcatcagaatggattttcaggacataggaatgaggtgctgcggtctgccatggct
cagaaggccataagcatgggtctagagcccagtgtggtggaaaagaccaccttggagaaa
atcagtaggacaggctcaggctactccagcctggaagcacttgtggaggattgtcttaac
aacacaccagagagtgatgctgtcaagacaccggaacaagatgaggacccactggagaaa
ctacggaagctacagagggagaaacagtgcaaaatatgcatggacagagatatttgtatt
gtcttcattccatgtggtcatctggtcacttgtaaggagtgttcagagtcgctcatcaag
tgtccaatctgctgtggagccataacacagaagctcaagacctatatcgcttga
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