Siniperca chuatsi (mandarin fish): 122880882
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Entry
122880882 CDS
T08948
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122880882 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
schu04052
]
122880882 (bdnf)
Cytokines and neuropeptides [BR:
schu04052
]
Cytokines
Growth factors (RTK binding)
122880882 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
122880882
NCBI-ProteinID:
XP_044062374
LinkDB
All DBs
Position
LG1:complement(14317095..14332205)
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AA seq
277 aa
AA seq
DB search
MFHQVRRVMTILFLTMVISYFSCMRAAPLRDAPGMRGHRTEGYLGAAATAARGHGTPQSG
GGPGQRGELPSLTDTFEQVIEELLEVEGEAAQLGQGADKSQGGGGPSSVVTTETKDVDLY
DSRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTA
VDKKTAIDMSGQTVTVMEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRT
TQSYVRALTMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccaggttagaagagtgatgaccatcctgttccttactatggttatttcatac
ttcagttgcatgagagctgcgcccctgagagacgccccgggcatgcggggccatcggacg
gaaggctacttgggcgctgctgcgacggccgcacgaggccatgggactccacagagtggt
ggtgggccaggccagcgcggggaactgccctcactcacagacacgtttgagcaagtgata
gaggagctgctggaggtggagggagaggcggcacagctgggacagggggctgataagagc
cagggaggtgggggcccatcctctgtggtcacaacagagaccaaggatgtcgacctgtac
gactcgcgggtgatgatcagcaaccaagtgcctttggagccgccgttgctctttcttctg
gaggaatacaaaaactatctggatgccgctaacatgtccatgagggtgcggcgacactcc
gatccctcacggcgcggagagctcagtgtgtgtgacagtattagccagtgggtgacggct
gtggataaaaagacggcaatagacatgtctgggcagacagttaccgtcatggaaaaggtc
cctgtccccaatggccaactgaagcaatacttttatgagaccaaatgcaaccccatgggg
tacacaaaggagggctgcagaggaatagacaagcggcattataattcccaatgcaggaca
acccagtcctacgtgcgagcgcttaccatggatagcaaaaagaagattggctggcggttt
ataaggatagacacttcgtgtgtatgcacattgaccattaaaagagggagatag
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