Siniperca chuatsi (mandarin fish): 122881251
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Entry
122881251 CDS
T08948
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like isoform X1
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122881251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
schu04050
]
122881251
Cytokine receptors [BR:
schu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
122881251
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
122881251
NCBI-ProteinID:
XP_044063127
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Position
LG9:complement(18206187..18226003)
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AA seq
399 aa
AA seq
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MLFTASFSWAFQQQVVPPKYRDPVTDLLCDQCPPGTAVKRHCTADTPTECQACPEKHFAE
NWHWGDTCQYCTSVCKEKQLVKQQCNSTHDQLCECAPGFHLVVEFCITHSTCPPGRGVTA
LGTPVSDTVCERCPAGHFSTGGSSTESCQPHRNCSDLGLKTLRRGTSTSDSLCGTQDKTA
TLECSKHHTLCHTDVNLCEEAVFQSLSSLRLSSVPLERLLESLPGRRVDRKSLEKLKKAC
SPQQQVLQLLRLWREQNKDQDKLYGIIQGVNHCERKVSRCNGLKNLTLDDLLKVTNSLPG
VKVQQEDVQAVVSTCLPSQYMLQLLHLWKTANYDLDLAKGLSHSLRVMRSQGAPRYLLKG
LKKISRIIGTTSAHKMYEKMFVSMLQDESCFKEHKPLNE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcacagcttctttttcctgggccttccagcagcaggtcgtaccgccgaagtac
cgtgaccctgtgactgacctactgtgcgaccagtgccctcctggcacagctgtgaaacga
cactgcactgctgacacacccacagagtgccaggcctgtcctgagaagcattttgctgag
aactggcactggggggatacatgccaatactgcacctcggtgtgtaaggagaagcaactt
gtcaagcagcaatgcaacagcactcatgaccagctgtgtgagtgtgctccaggtttccac
ctagtggtagagttttgtatcacacacagtacctgcccacctggcagaggagtgacagct
ttaggtacgccggtgagtgacactgtgtgtgaacgttgccccgctggtcatttctccact
ggcggctcctccacagagtcatgtcagccccacagaaactgctcagatttgggcttgaag
acactgagaaggggcacgtccacttcagacagcctctgtggcactcaggacaagacggca
acactggagtgctctaagcatcacactttgtgccacactgatgtgaacctgtgtgaggag
gcggtctttcagtcactctcctcgctgcgactgtcctcagtgcccctggagcggctgttg
gagagtcttcccgggcggagggtggatcgtaagagcctggagaaactgaagaaggcctgc
tctccccagcagcaggtcctccagctgctgcgactgtggagggagcagaacaaagaccag
gacaagctgtacggcatcatacaaggtgtgaaccactgtgagaggaaagtgtcccgctgc
aacggcctgaaaaacctgaccctagatgacctcctgaaggtcaccaacagcctgccaggg
gtcaaagttcagcaggaggatgtccaggccgtggtctctacctgcctgcccagtcagtat
atgctgcagcttctacacctctggaagacagcaaactatgacctggatctagccaaaggt
ctctctcacagtctgagggtgatgcgcagccagggggcaccacgctatctgctgaaaggc
ctgaagaagatcagccgcatcataggaaccacctctgcgcacaagatgtacgagaagatg
tttgttagtatgctccaggatgagtcgtgttttaaggaacataagccattaaatgaatag
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