Siniperca chuatsi (mandarin fish): 122881587
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Entry
122881587 CDS
T08948
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122881587 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122881587 (setdb1b)
Enzymes [BR:
schu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
122881587 (setdb1b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122881587 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
122881587 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
122881587
NCBI-ProteinID:
XP_044063887
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All DBs
Position
LG9:complement(12836434..12853678)
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AA seq
1234 aa
AA seq
DB search
MESSDGMEVEGWDPGLEEELGISLDELKKWIEEAVEKSEVVQKKKAQLTELKEWVEQKEE
EEAKTEMLLNDANQSVLECEKLVKATYHRNGLVYRESSSEDEGGGGGVLSSEVIEIDDDD
DDDVIAVGCLVPPKKPVTPGKDPVVKEASAALQKTSQQVQKLFQMVSKPSPGAPLLRSPA
QPPSQSGIQGSVPAVFVSQVPSQSMTQPNPNVTEDELRVGMSILGKKRTKTWHRGALVAI
SPVGNGIFKYKVKFDKGKSLLSGNHVAFDYNPTLEILYVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVTLPELYPVCRPLKRTWEDIEDASCRDFIEEYITAYP
SRPMVLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNL
KMTTANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGHVGASPVKTPQASPSQPSQTPQ
HPQRPQPQQPPQTQQIQQTSQPPRVDNKHQMAKKSTSPFVPGVGGTHASKVMQSLSSSPS
NLSGGRMLNVQNIVTPTFTQSYQRQLPTLAPAPSPITHAMATIPHQPAYRAPTDRIFYLA
HTCQPACLNRVRPAQPDMHRGKNPLLTPLLYDFRRMTGRRKVNRKMSFHVIYKAPCGLCL
RNMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRPFQPQRPFYYIPDITSGKEDIPLSCVN
EIDSTPPPKVAYSKERIPEDGVYINTSPDFLVGCDCTDGCRDKSKCSCHQLTLQATGCTP
GGQINPNAGFLHKRLEECLPTGIYECNKRCKCCPQMCTNRLVQHGLQVRLQLFKTQNKGW
GIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAH
CSDSEGSGVDVSRIKIQPSALISANPVGRPPKKDQSPSSSGDSNDDDDKDSKSEDESDSS
DDTFVKDNYYSSSSVWRSYTTRGQVKGNKEGSQDSKDGLSASARGTDDDKPPSMPEETGK
SKVASWLTSQGLKKESGDNKSQVKSEMGKKQDVMTLSDSDDVQTISSGSDDNKEREKVTP
GVTKKQVAVKSTRGIALKSSHGMMVKTGASGGGGGPGGQGGKTGQQGQTGGGGENTPKNT
RLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRA
GTELTWDYNYEVGSVEGKVLLCCCGSTECRGRLL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagcgatggaatggaggtggagggctgggaccccggtctggaggaagagctg
ggcatttctctggatgagctgaagaagtggattgaagaggccgtggagaagagcgaggtt
gtgcagaagaaaaaggctcagcttacagagctcaaggaatgggtggagcagaaagaagaa
gaggaggcgaagacggagatgcttctcaacgatgccaaccagtctgtattagagtgtgag
aaactggtgaaggcaacttaccataggaacgggcttgtttaccgtgagagcagctcagaa
gatgaggggggcggaggaggcgtgttgtcctctgaggtcatcgagatagacgatgacgac
gatgatgatgtcattgctgttggctgtttggttcctccgaagaagcctgttactcctggt
aaagatccagtggtaaaagaggcatccgcagctttacagaaaacctcccagcaggtgcag
aagttgttccaaatggtcagcaagccttcaccaggtgctccattgctccgatctccagca
cagcctccatcccagtcaggtattcagggttcagtgccagcagtatttgtttcccaggtt
ccatctcagtccatgacccagccgaacccaaacgtgacagaagatgagctcagagtcggg
atgagcattctgggaaagaaacgcactaagacctggcacagaggcgccctcgtcgccatc
agccctgtcggaaacggcatcttcaagtataaagtgaagtttgataaaggaaagagcctg
ctgtctggtaatcatgtggctttcgactataaccccaccctggagattctgtatgttggg
gctcgtgtagtcgccaagtacaaggatggcaacctggtgtggctctatgctggaatagta
gcagagatgcccaacaacaagaaccgtatgaggtttttgatcttctttgatgatggctat
gcttcatatgtgacactacctgagctctacccagtttgccgaccattaaagcgtacctgg
gaggacatagaggatgcatcgtgtcgagacttcatcgaggagtacatcactgcctatccc
agcaggcctatggtgctcctaaaggttggccagatcatcaagacagagtgggagggaacc
tggtggaagagcaaagtggaggaggtggatggaagcttggtcaagatcctctttttggat
gacaagaggagtgagtggatctacagaggctccaccaggttggagccaatgttcaacctg
aagatgaccaccgccaacacccaggagaagaagctggctggccagcagaggacacggcct
aacatgggggcgttgaggagtaaaggcccagttgttcaatacaccagtgacggacatgtt
ggagcctctcccgtcaaaacacctcaggcctcacccagccagccttcacagacaccacaa
catccacagcgtcctcagccccaacagcccccacaaacccaacaaatccaacaaacctct
cagcctccacgtgttgacaataaacatcagatggcaaagaagagtacttcgccgtttgtc
cctggggtgggaggcactcatgcctctaaagtcatgcagtctctttcctccagtcccagc
aacctctctggtggaagaatgttgaatgtccaaaatattgttacacccacattcacacag
tcgtatcagagacagctgcccactctggctccggccccctctcctatcacccacgcgatg
gccaccatcccacatcaacccgcataccgtgccccaacggaccgcatcttctacctggca
cacacttgtcagcccgcctgtctgaatcgtgtccgacctgcacaaccagacatgcacaga
ggaaagaaccccctcctcacacctttactgtacgatttcagacgcatgacgggacgacgc
aaagtcaaccgcaagatgtccttccacgtgatctacaaggctccatgtgggctttgcctg
cgtaacatggcagagatccagcgctaccttttccagacacactgtgactttatattctta
gagatgttctgtctagacccctacgtccttgtggaccggcccttccagccacagaggcca
ttctattacattcctgacatcactagtggaaaggaggacatcccactctcctgcgtcaac
gagatcgattccaccccgcctcctaaagtagcttacagtaaagagcgtattcctgaagat
ggagtatacattaacaccagtccagacttcctggttgggtgtgattgcactgacggctgt
cgagacaagtccaaatgctcttgccaccagctgacccttcaggctacaggttgtacaccg
ggggggcagatcaacccaaatgctggatttttgcacaaacgattagaggagtgcctcccc
acagggatctacgagtgtaataagcggtgcaaatgctgtcctcagatgtgcaccaaccgg
ttggtgcagcatggcctgcaggtgcgtctccagctctttaagacccagaacaaaggctgg
ggcatccgctgtctggatgatgtggccaagggctcttttgtctgcatctacgctggtaaa
atcttgacagatgactttgctgacaaagaaggtctagagatgggcgacgagtatttcgct
aatctggaccatatagagagtgtggaaaacttcaaggagggctacgagagtgaggctcac
tgttcggacagcgaggggagcggtgtggacgtgtcgaggataaaaatccaaccatccgct
ttaatatcagctaaccctgtggggcgtccgcccaagaaggaccaaagtccaagttcatca
ggggacagcaatgatgacgatgacaaggattcaaagagtgaagatgaaagtgacagttca
gacgacacttttgtgaaggacaactactacagctccagctctgtgtggaggagttacacc
acacgtggtcaggtcaagggcaacaaggaagggagtcaagatagtaaagatggattgagt
gcgtcagccagaggaaccgatgatgataagccaccgtccatgccagaggagacggggaaa
agcaaagtggcttcgtggcttaccagccaggggctgaagaaggaatccggagacaacaaa
agtcaagtgaaatcagaaatggggaagaagcaggatgtgatgactctctctgacagtgat
gatgttcagaccatcagctctggatctgacgacaacaaggagagagagaaagtcacccca
ggtgtgactaagaagcaggtagcagtgaaatctacacgtggcatcgccctgaagagcagc
cacgggatgatggtaaaaacaggtgcgtctggaggcgggggagggccaggaggtcaggga
ggaaaaactggacagcagggacagactggaggaggcggggaaaacactcccaaaaacacc
cgcctgttctttgatggtgaagagtcctgctacatcatcgatgccaagttggaaggaaac
cttgggcgttacctcaatcacagctgtagtcctaaccttttcgtccagaatgtgtttgtg
gacacacatgacttgcggtttccttgggtggcattctttgccagcaagcggatccgggcc
ggcacagagctgacctgggactacaactatgaggtggggagtgtggaggggaaggtgctg
ctctgctgctgcggatccactgagtgcagaggaagactgctgtga
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