Siniperca chuatsi (mandarin fish): 122882046
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Entry
122882046 CDS
T08948
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03250
Viral life cycle - HIV-1
schu03260
Virion - Human immunodeficiency virus
schu04060
Cytokine-cytokine receptor interaction
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122882046 (cd4-1)
03260 Virion - Human immunodeficiency virus
122882046 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122882046 (cd4-1)
04514 Cell adhesion molecules
122882046 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
schu04090
]
122882046 (cd4-1)
CD molecules [BR:
schu04090
]
Proteins
122882046 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
Ig_2
I-set
Izumo-Ig
C2-set
LPG_synthase_TM
DUF4381
DUF6249
RIFIN
ASFV_J13L
TMEM154
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
122882046
NCBI-ProteinID:
XP_044064953
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Position
LG9:complement(11393494..11411091)
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AA seq
469 aa
AA seq
DB search
MKNLIKSILILIPVLMSTTGTEEVVYAQVGDTVTLKPPRRDNLKDHYLYWSFGHEDLQLA
WRNPHGGQGFDKSPWNHSLSMSDDSLVIHHIKQEHFGTFICKLTMNRNSFVITYKLLKLN
VIMNPPFPLLPLESLSLVCNAESPQSLMKPEIYWLTPQGEKIKINEGRLTMRATSQHSGE
WTCVVTNGEKEYKATKSVIVVDLSPAPLRPQYTSKSSPLTVPCSIAPHISWDKIIAKGIQ
GVHWDFFPISGLSSAVPQKLFSLCLGDELTWKTEKNTGLKPVKDLKKGNLTLIGKLRSEE
DAGDYVCALNFTNGVILKRTVHVNVLQIISSPGTDFISGQQVNLTCSIGHPLPSDLQVKW
IPPKALSLPSLRPDHHHLTIPEVGTGDSGTWRCELWQNSTLLTSATIVLKIESKLSVWML
VIICSVIVIAILLLVLIFTLYRRKQRKMRHLRHRLCQCKNPKPKGFYRT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttaattaaatccatcctcattctcatccctgtgctcatgtcaacaacaggg
acagaagaggtggtatatgctcaggtgggagatacggttacgctaaagcctccaaggagg
gataatttaaaggaccattatttgtactggtcatttggtcatgaggaccttcaacttgcc
tggcggaatccccatggcggacaggggttcgacaaaagcccatggaaccattctttgtcc
atgtctgacgactcactggtcatccaccacatcaaacaagaacactttgggacttttatc
tgtaaactgactatgaatcgtaattcattcgtaatcacatataaactactcaaactcaac
gtgattatgaacccaccatttcctctgctgcctttggaatctctgtctctggtctgcaac
gcagagtctcctcagagtctcatgaagccagagatatactggctgactccccagggagag
aaaataaaaattaacgaaggaagactcaccatgagagccacaagccaacacagtggcgag
tggacctgtgttgtgacaaatggtgaaaaagaatacaaggccacaaaatctgttatagtt
gtggacctctccccagctcctttacgtcctcagtatacgtctaaatcctcgcctctcact
gtcccctgttccattgcccctcacatctcctgggacaaaatcatagccaagggcatccag
ggagttcactgggacttcttccctatatcaggtctcagttctgctgttccacagaagctc
ttctccctgtgtctgggggatgaactgacctggaagacagaaaaaaacacaggactgaaa
cccgtgaaagaccttaaaaaaggaaatttgactttgatcggaaaactacggagtgaagaa
gacgcaggggactatgtgtgcgccctgaatttcacaaatggtgtaattctgaagaggact
gtacatgtaaatgtgctgcaaatcatctcctccccaggaacagacttcatttctggccag
caggtcaacctgacttgcagcattggccatccgctgccctctgacctgcaagtgaaatgg
atcccacctaaagcattgtcccttccgtctctgagacctgaccatcaccatctcaccatc
ccggaagtggggacaggagatagcggaacatggaggtgtgagctgtggcagaacagcaca
ctgctgacgtcagctacgatagtgctgaagattgaatccaagctgagtgtgtggatgctg
gtgatcatatgtagtgtcatagtcatcgcaatcctcctcctcgtactcattttcaccctc
taccgacgcaaacaacggaagatgagacacctcaggcatcgactctgccaatgcaaaaac
ccaaagcccaaaggattctacagaacataa
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