Siniperca chuatsi (mandarin fish): 122882406
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Entry
122882406 CDS
T08948
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122882406
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122882406
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
HEAT
V-ATPase_H_N
AP5B1_N
DUF2615
Motif
Other DBs
NCBI-GeneID:
122882406
NCBI-ProteinID:
XP_044065672
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All DBs
Position
LG10:complement(17705026..17721641)
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AA seq
719 aa
AA seq
DB search
MMAPEPLRSALTIVGAEDTSLALPSDTEQRSGQQRVLDQVFTIKRSKSKHGKNGSLSPSP
TSLSPQTLTTYAEFGSFKFSPSKANGTFSHTNSTMSTGYSKANTQRSRTLSAKAMRGRHV
STSGTWEQQINASTLPHNPQRLKPSRSDPALAPPFSPAPAPAPVMRAKGQAVQSQHSLQT
RVNRHSTYSMTNGTQMTNSQTRIVRPPSAQSHIEDRMGTIKISKLEQQSAVNTSDLTLKE
AVGFLSHPEENYQQCGASFIHHLTFKEEHAKQEVSQLGGIPLLVTLLRSPNPGVSQASAG
ALRNLVFKDQNNKLEVQHCGGIAKALQLLKEADSTETQKQVTGLLWNLSSADELKEELIA
TALPALTENVVVPFTCWSDNSSINNIHPDVFYNATGCLRNLSCAKKKERQAMRECRGLID
SLMSYIQSCVAEENPDDKSVENCACILHNLTYQLETESPECFSKLQPQTGSQAGSKKSPT
IGCFSPKSSKAQKEFSFDAARGMPEDSTPSGVKWLCHPKAMQTYLSLLGSSQNNATLEAC
CGALQNLTASKELGSSAMSQILVQKLGVLLHMPTLLKSPNRSLQKTAMSLLGNMSRTSSL
QTTMAKQILPELTSLLSSGPLLMGKSDETISTACSTVRNLILADTEVSKKVINNELVSSL
TDLSENGSFPKGRKAASVLLYSLWNEKNLQGFVKKLGFGKSLFVNDYTTAVRKSVQVIE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggaaccgctgcgatccgcgttgacaatcgtgggcgccgaagacacgtcg
ctcgcgctgccctccgacaccgagcagcgctcgggacagcagcgcgtgctggatcaggtg
ttcaccatcaagaggagcaagtccaaacacgggaagaacggctcactgtcgccttcacca
acaagcctgtctccccagactttgacaacatatgccgagtttggatcgttcaagttttct
ccatccaaagcaaatggcaccttcagccacaccaactccactatgtcaacaggctacagc
aaagcgaatactcagaggagtcgcactctatccgctaaagccatgagaggaagacatgtc
agcacctcaggcacatgggaacagcaaatcaacgcttccaccttgccccacaatccccaa
cggctgaaacccagtcgcagtgaccctgccttggctcctccattttctcctgctcctgct
cctgcacctgttatgagagccaaagggcaggctgtccagagccagcactccctccagact
cgagtaaatagacacagcacctattctatgaccaacggcactcagatgaccaacagccag
acacgcatcgtcaggccgccctctgcccagtctcacattgaggacaggatgggtaccatc
aaaatatccaagttagagcagcaatcagcggtgaacacatcagacctgaccctaaaggag
gctgtagggttcctgtctcaccctgaagagaattaccagcagtgtggagccagcttcatc
caccacctcaccttcaaagaggagcacgccaagcaggaggtttcccaactaggaggtatc
ccccttctggtgaccctgctgcggagccccaaccctggggtgagccaggcttctgctggc
gctctgaggaacctagtattcaaggaccagaacaacaagctggaggttcagcactgtggc
ggtatagctaaggccctgcagctactaaaggaggcagattctactgagacccagaaacaa
gtcactggcctgctatggaacctgtcctccgccgatgagctgaaggaagaacttatagct
acagcactgcccgccctgactgagaatgtggtggtgccattcacctgctggtcagacaac
agctctatcaacaacatacaccctgatgtcttctacaacgccacagggtgcctgcggaac
ctgagctgtgccaaaaagaaggagaggcaggcaatgagagagtgccgtggcctcatcgac
tccctcatgagttacatccagtcctgtgtggcagaagaaaaccctgatgacaagtctgtg
gagaactgtgcatgcatcctccataacttgacctaccaactggagaccgagtcccctgag
tgcttcagcaagctccagcctcagacagggagccaagctgggagtaagaaaagccccacg
attggatgcttcagccccaagagcagcaaggctcaaaaggagttttcatttgatgctgct
cggggaatgccagaggacagcaccccatcaggtgtgaagtggttgtgccaccccaaagcc
atgcagacctacctgtccctgctgggctcttcccagaacaatgccacccttgaagcctgc
tgtggtgctctgcagaacctcactgccagcaaggaactggggtccagtgccatgagccaa
attctggttcaaaagttgggggttctactgcacatgcccacacttttaaagtcccctaac
cgcagcctgcagaagactgccatgtccctgctgggtaacatgtctcggaccagcagtttg
cagaccaccatggcaaagcagattctgcctgagctcaccagcctcctctcctctggcccc
cttttgatgggaaagtctgacgaaactatatcaacagcttgcagcacagtacggaatctg
atattggcggacactgaggtcagcaagaaggtcattaataatgaactggtctcatcactg
actgacctcagcgagaatgggtctttccccaaaggcaggaaagcagcttccgtgctgctc
tacagtttatggaacgagaagaatttgcaaggttttgtgaaaaagctgggatttggcaaa
tcgctttttgtcaatgactacaccacagcagtgcgcaagtcagtgcaagttatcgagtga
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