Siniperca chuatsi (mandarin fish): 122883960
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Entry
122883960 CDS
T08948
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122883960
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
122883960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
122883960
NCBI-ProteinID:
XP_044069095
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All DBs
Position
LG11:complement(14502635..14507830)
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AA seq
928 aa
AA seq
DB search
MARLVLEQLSDFGDYTGGKELTEIFKLTNNEQSNVRLSPDGRHIHVILRKPKVGLVTFDK
YERPQLAQNQKKLDLRLTRTVPIVDVLYLDHSNSSSRATAAVAVVYEDGKAEFWKFQECK
VGWHLLQTSDLCNSPRARVVSVCVCSNLIIWCEERPPSESSPALSSTRNMLRYCVCRRDF
EVEEGAVSLGGVKIALHNNPKFTVVSSGEYVHLLPDLKVKPLLSISKFFLSWSPRHDSFT
VNTTCKNTPLKKLSAKESDFKRLVTDCLGYLLTLEPPEIYNVSPTTCGGLLLLLSTGWVC
LLQKDGMLRQVYKLADNCLVTFGSHTSLCMYQDTLALLIGQNLHLIDVNCGRELEKIMLQ
REGLLYVNRAERKTPHLLSETGLFVVLNKETDSRDCNSKMKPSGFSMVESIHPGALLVEA
VFEEACKYYQQRSLSSTQLTVDTLKKGGRFQAPISLASILRNYLSAGSRQKGAELSQNGG
DGCTAGQDKLMGSLEAELKALVSLEEVKGSLVRGSVKEVEAMCENLVEKEVARLLSSSEL
DKEALLYLNSIFSIFPSQVWRAAQAALQLHYNGEGSLSSRAPPDVWKTVLSPALTPSTPA
SLQFTNGRPQHNHSLKADHIANCKAKPASSTSPAALPVFELLCQSVFHFQPSWLPSFLEL
AQQQQGSAGLGLSLASSSWSFSGGRGGEGGENNVPLYKRALCVLSSLSPDRDQYQDLEVE
LLLVCGRPNAILQALRILMAKQQWERVTQVAQKFCKQSPLLNKEIFTTLLCEVAQHRDLD
PYLDLLWVLCPEDLTVTTILNLVLKNLPSPNSSSSSMSSTTSSSPAPFADSQSSQLTIGL
LKPLLRKVLQRETKPSQCYADILQSPSYPPPAPPRQPAEQPRAVTDPSTDSALGSNIAPA
LLAETPEQQSSTHTNVSRARVALPANPV
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggttggtgttggagcaactgtctgatttcggcgactatactggcggtaaagag
ctgactgagatctttaaactgaccaataacgagcagtcaaacgttcgcctgagcccagat
ggacgtcacatccacgttatcctccgcaaacctaaggtcggtctcgtgacttttgacaag
tatgagagaccccagctggcccagaaccagaagaagctggatttgaggttgacacgaact
gtgcctattgtggatgttttgtatttggaccatagtaatagcagcagcagagccacagca
gctgtggcggtggtttatgaggatggaaaagctgagttttggaagttccaggagtgcaaa
gttggctggcatcttctgcaaacatcagacttgtgcaacagccccagagcaagagtggtg
tctgtctgtgtctgttccaatcttatcatctggtgtgaggagaggccaccctcagaaagc
tcccctgccctcagctccacaaggaatatgttgagatactgtgtttgcagacgtgacttc
gaggtggaggagggggctgtcagcctgggaggagtgaaaatcgccctccacaacaatcct
aaattcactgtggtcagctcaggtgaatatgtacatcttcttcctgacttgaaagtgaag
ccgctgttgagcatctccaaattttttctctcctggtcccctcgccatgactccttcaca
gtcaacaccacatgtaaaaacactcccctaaaaaagctttcagctaaagagtctgacttt
aagaggttggtgacagactgtttaggatatttattaactcttgaaccacctgagatctac
aatgtctctcctacaacctgtggaggcctgctgctgctgctcagcacaggctgggtgtgt
cttctgcagaaagatgggatgctgcggcaggtatacaaactggcagacaactgcttggta
acatttggttctcacactagcctctgcatgtaccaggatacccttgcgctgctaataggg
caaaacctgcatctgatagacgtgaactgtggcagagagctggaaaagatcatgctgcag
agagaggggttattatatgtaaaccgggctgaaagaaagacacctcacctgctctcagaa
actggactttttgtggtattgaacaaggagacagactccagagattgtaactctaagatg
aagccttccggtttcagtatggtggagagtattcatcctggagccctcctggtagaggct
gtctttgaggaagcctgtaaatactaccagcagagaagcctgagcagcacccagctcact
gtggacacgctgaagaaaggaggtaggttccaggctcccatctctttagcctccatcctc
aggaactacctcagtgcagggtcgaggcagaaaggagcagagctgtcccagaatggagga
gatggatgtacagcaggccaagacaagctaatgggctctctggaagctgagctcaaggct
ttggtttctctggaagaggtgaagggcagtttagtgaggggaagtgttaaagaggttgag
gcaatgtgtgagaatctagttgagaaagaagtagccaggctgctgtcatcctcagagctg
gataaagaggctctgctttacctcaactctatcttcagcatcttcccctcccaggtgtgg
agggcggcgcaggctgcccttcagctacactacaacggggagggctctctgtccagcagg
gctcccccagacgtgtggaaaactgtcctcagtcctgctctgacacccagcaccccagcc
tccctccaattcacaaacggcaggccacaacacaatcatagcctcaaagctgatcacatt
gctaactgtaaagccaaacctgcaagctccacttccccagctgccctgcctgtgtttgag
ctcctctgccaatcagttttccacttccagcccagctggttgcccagtttcctcgagctc
gctcagcagcagcagggctccgctggcctcggcctgagcctggcctcttcctcctggagc
ttctccggtgggcgaggaggggagggcggggagaacaacgtgccactctataaacgtgcc
ctatgcgtcttgtccagcctgagcccagacagagaccagtaccaggacttggaggttgag
ctgcttctggtttgtgggcgacccaacgccatcctccaggcactgaggatcctcatggcc
aagcagcagtgggagcgggtcacccaggtggcccagaagttctgcaagcagagtccgctg
ctcaacaaggagattttcactactctgttgtgtgaagtggcccagcacagagacctggac
ccttacctggacctgctgtgggtgctgtgcccagaggacctcactgttaccactattctc
aacttggtgctcaaaaacctcccttcccctaactcttcttcctcctccatgtccagtaca
acctcctcatcccctgctccctttgcagactcacagagcagccagttgaccatcggactg
ttgaaacctctgctgagaaaagtccttcagagggagactaagcctagccagtgttatgct
gacatcctccagtcaccatcatacccccctcctgcacctcctcgccagcccgcagagcag
cccagggctgtcacagatcccagcacagactctgctctaggtagcaacattgccccggct
cttcttgcagaaacacctgaacagcagtcatccacacacacaaatgtctcaagagccagg
gtggcactacctgctaacccagtctga
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