Siniperca chuatsi (mandarin fish): 122884111
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Entry
122884111 CDS
T08948
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122884111 (pkp1b)
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
122884111 (pkp1b)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
ZER1-like_2nd
Ish1
FANCF
Motif
Other DBs
NCBI-GeneID:
122884111
NCBI-ProteinID:
XP_044069459
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Position
LG2:complement(9724866..9735551)
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AA seq
712 aa
AA seq
DB search
MTSLYPLKSVISIENVDDTSLALPSKNQYRSGQQRVLDQVQTIRRTRSRQSTSRSGSTSL
SPTSPVYDSVFVDALKSQSNTSNGSLFFGNGLSKPGSSVKRNTAASTYHYERSYAPVGSM
AVGQTNTSRSEPDMAWQRAMPKRSAPPQRLLSNMSTYRAERATSHFLSSATSQPLYTING
TGQTKTNTEFVCNRVGMSKTLPKPPVTECAPKSRGDTGLNDNSGVADITMKEAVEYLSSH
EETYQHCGASYIQHNTFIDDKAKEEVLKLNGIPPLVGLLRSPSPLVNQTASAALRNLSFK
SNSNKEVIHHCGGITEAVALLRDTDSVEIQKQLTGLLWNLSSVDSLKPDLLKSALPVLME
RVILPYTTGPNRTNSDSQDPEVFFHATGCLRNLSSVKQSNRQAMRKCRGLIDSLVSYVKD
CVDAGNPDDKSVENCVCILHNLTFQLEAEAPALFSRITTLAQTVNRSHSQGDTGPIGCFS
PQSKSPEQERHFDFPVVEDPQPNGAGWLIHSKTLQSYLSLLDSSQQEETQEACCGALQNL
TAHEGIISGVMSQIIVQKVNGLQIISPLLKSNKVNLQRSTVALVGNLTKNPNLHNAIARK
ALPELLGILSAGTKEGNESDDTLAMACQTSNCLLMKDPEMGKRLLNNNLINSLKDLSQNE
YFPKTRKAAALLLYNLWSEKDLQSFLKKQGMIKSSFVNDVTMAAQKSVQIVD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtctgtatccgctgaaatcagtcatttccatcgagaatgtggacgacacatcg
ctggctctgccgtccaaaaaccagtaccgatcaggccagcagcgcgtcctggatcaagtg
caaactatcaggaggaccagatcgaggcagtccaccagcaggagtggatctacttcctta
tctccaacaagccctgtgtatgactccgtgtttgtagatgctttgaagtcacagtcgaac
acatctaatggaagtctcttcttcgggaatggcttgtctaaacctggatccagtgtgaag
aggaacacagcagcttctacctatcattatgagaggagttacgcccctgtcggctccatg
gcagtcggtcaaaccaacaccagccgcagcgagcctgatatggcctggcagcgtgccatg
ccaaaacgctctgctcctccgcagagactcctttccaacatgagcacctacagggcagaa
agggccaccagtcattttttatcgagcgccacatcccagcctctgtacactataaatggc
acaggtcagaccaaaacaaacacagagtttgtgtgcaaccgagttggcatgtctaaaaca
cttccaaagcctccagttaccgagtgtgctccgaagagcagaggagatactgggttaaat
gacaacagtggagttgctgatatcactatgaaggaggctgtggagtatctttccagccat
gaggagacatatcagcactgtggcgcttcctacatacagcacaacactttcattgatgac
aaggctaaagaggaggtgctgaagctcaatgggatccctcccttggtgggtctgctgcgc
agccccagtccactggtcaaccagacagcctcggctgccctccgtaacctgtcctttaaa
agcaacagtaacaaggaggtgatacatcactgcggtggcatcacagaggctgtggctctg
ctcagagatacagactctgtagagatacagaaacagctgacaggtctgctgtggaatttg
tcctctgtagacagcctgaagccagacctgctgaagagtgctctgcctgtcttaatggag
cgtgtgatcctgccttacacaacaggtcctaacaggaccaacagtgacagccaagaccct
gaggtcttctttcatgccaccggatgtctgagaaacctaagcagtgtgaagcaaagcaac
agacaggcgatgagaaaatgtcgaggtttgatagactctttggtcagttatgttaaagac
tgtgtggacgcaggaaatccagatgataagtctgtagagaactgtgtgtgcatcctgcac
aacctgacattccagctggaggcagaggctccggctctgttcagcaggatcacaactttg
gcccagactgtcaacaggagccacagccagggcgacactggccctatcggctgcttcagt
ccacagagcaaatcgcccgaacaggagcgccactttgacttcccagtcgttgaggatcca
caacctaatggggcaggttggctgattcactccaaaactttgcagagttacctgtctttg
cttgactctagccagcaagaagaaacacaggaagcctgttgtggagcgctgcagaacctc
accgcacatgaaggcattatctccggtgtaatgagccagatcattgtgcagaaggtgaat
ggactgcaaatcatcagtcctcttttaaagtcaaacaaggtcaacttgcagaggagcaca
gtggctttggtaggaaacctgaccaagaacccaaacctgcacaatgccatagctcgtaaa
gccctcccggagctgcttggcatcctcagtgcaggcaccaaggaaggtaatgagtctgat
gacacactggccatggcctgccagacctccaactgcctgcttatgaaggaccctgagatg
ggcaagcggctgttaaacaacaacctgatcaactcactgaaggatctcagccaaaacgaa
tatttccccaaaactagaaaagctgcagccctgcttctctacaacctctggtcagaaaaa
gatttacaaagcttcctgaaaaagcaagggatgattaagtcctcatttgtgaatgatgtc
accatggcggcacagaagtcggttcaaattgtcgattaa
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