KEGG   Siniperca chuatsi (mandarin fish): 122884134
Entry
122884134         CDS       T08948                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122884134 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:schu03041]
    122884134 (smndc1)
Spliceosome [BR:schu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122884134 (smndc1)
 Complex B
    122884134 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122884134 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730
Other DBs
NCBI-GeneID: 122884134
NCBI-ProteinID: XP_044069504
LinkDB
Position
LG11:complement(18040416..18057451)
AA seq 235 aa
MSDELLKQLNSYKAQLQQVEVALSTDPENEDLLKLQKDLQEVIDLTKDLLTSQPAESASS
TNGSDTVPLKHGWKVGDRCMAAWSQDGQVYEAEIEEIDRENGTAAVTFSGYGNAEVIPLQ
NLKAVEEGKRSDDDKPKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQFNN
KAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 708 nt   +upstreamnt  +downstreamnt
atgtcggacgaattgctgaaacagttaaacagctacaaagcccagctacagcaagtagaa
gttgccttatctactgacccagaaaatgaagacctcctgaaactacaaaaagacttacag
gaagtcatcgatttgacaaaagacctcctgacctcacagcccgctgagagtgcttccagt
accaatggctcagacacagtccccctgaagcatggctggaaagtgggggacaggtgtatg
gctgcgtggagtcaggacggacaggtgtatgaggctgagattgaggagatagaccgagag
aacggcactgcagccgttaccttctctggatacgggaatgctgaagtgattcctctgcag
aacctcaaagcagtagaggaagggaaacgctctgatgatgataagccaaaatcaaggaaa
gagcagatagcagagcagagagagtataagaagaagaaagcccagaagaaggtacagagg
atgaaggaattagagcaagagagggaggagcaaaagtcaaagtggcagcagttcaacaac
aaagcctactcaaagaacaagaaaggacaggtaaagaggagcatatttgcatctccagaa
agtgtaaacgggaaggtgggagtgggaacatgtggtattgcggacaagcccatgacccag
taccatgacacgtcaaaatacaatgtcagacatctaatgccacaatga

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