Siniperca chuatsi (mandarin fish): 122884521
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Entry
122884521 CDS
T08948
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04217
Necroptosis
schu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122884521 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122884521 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122884521 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122884521 (tnfaip3)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122884521 (tnfaip3)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C64
122884521 (tnfaip3)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
122884521 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
122884521
NCBI-ProteinID:
XP_044070458
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All DBs
Position
LG11:complement(20815890..20828585)
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AA seq
822 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPTASGGLMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELVQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQQQ
KERLLKDYLLLIEIPVIGLGYDATRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGA
RIEGVVQTKGGVQGGVGVVGGSEIEVSSRGARSSSPPSSSSGRGVSSPRSAPPTAPSLSL
YSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPGAGTAATGLPGPNGGPTVPHP
AQGSGWTQWGGCETETERCSMCRQEAFRIFNGLCPPCMQRQQAPERGDPQQNNPRTEASS
SAWSQARDAERPCLTLTPGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQTNH
HLTPPPAPVQSRHGLEAGFQNASRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLNQVAHR
TPHSPPLVMRDRAAKPRSSQQSQTQTQTQCRRSGCSNVSPGCTDLCPECHTRGQGREAGR
RAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtctccaacctgctgaaggcg
gtgaagatccgtcagcgagtgcccaacgacgtggtgaagccgactgccagcggcggcctg
atgcaccacctgcggggtatgcaccgttacacactggagatgatcgccatgaaccacttc
ccgcaggccttcagggaggtggtgcaggccgccatcctggaccgagccatgcaggcctca
ttggagcaggagaagaagctcaactggtgtcgggaggtgaagaagatggtgcccttacgt
actaatggagatgggaactgtttgctccacgcagcctctcagtacatgctgggcgttcag
gacacagacctagtgcttcgaaaagccctccatggtgttttgaaagagacggacactggc
gtctttagagctcgcttccaggcagagctggtccagtcccaggagttcacccagaccgga
ctccgatacaccaccatgaactgggaggaggagtgggaaaagattgtgaagatggcgtct
ccggtctccagtagcaacggcctccagtttgactctctggaggacattcacatctttgtc
ctctccaacattctccgccgaccaatcatcgtcattgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctctgaatgtgggtgggatttatctgccactacactgg
ccgcccacagagtgctacaaatacccaatagtgctcggctatgactcccagcactttgca
cccctcatcaccatcaaagacagtggtccagagatccgagcagtaccgctgatcaaccca
ggacggggcggttttgaggagctgaaggttcacttcctgatggagaaagaacagcagcag
aaagagaggcttctcaaagactacctgctactgatagagatccccgtcataggcttgggt
tacgacgccacacggatcatcaatgctgcacggctggatgagggcaacctccctgaagac
atgaacctgatggaggattacctgcagctagtcaaccatgagtaccagcgctggcaggag
gacaaggagcaggcatgggccgcccagccgcagcgcccaccgcccttctccgtctcccag
ctctccctcatcgagattcgctgtgccacaccacgatgcaccttctatgtctctgtggac
acacagcctcattgccatgagtgctttgagaagcgacaggccactactggtggaggagcg
aggatagaaggggtggtgcagaccaagggaggagtacaaggtggggtaggagtggtaggg
ggatcagagattgaggtgagctccagaggagcccgaagcagcagccccccatcctcctcg
tcggggagaggggtatccagcccccgctcagccccacccaccgctcccagcctcagcctg
tacagtgaaactcatgccatgaaatgcaagacaccgggctgcctcttcaccctcagtgtg
gagcatgatggactttgtgagcgctgcttcaactccaggcagaaccatggaccccctgga
gctggaacggctgctacaggactcccaggccccaatggggggcctacagtcccccacccg
gcccagggctccggctggacccagtgggggggctgcgagacagagacagagcgatgcagc
atgtgcagacaggaggcgttcaggatattcaatggcctgtgtccaccctgcatgcagaga
cagcaggctccagagaggggagacccacaacagaacaaccccaggactgaggcctcatct
tcagcttggagccaggccagggatgctgagcggccatgcctcaccctaaccccagggcac
acctcagcctggcaagcccctctggcccgcccttgtaaacgatctggttgccagttcttt
gggacgccagagaagttgggtttctgcactatttgctacgtagactatcagactaaccac
cacctgacccctccccctgccccagtccagagtcggcatggtttggaggcaggcttccag
aacgcctcacggtgtcgtgggcctgggtgtggtgcagttggaaaggcaatgctggagggc
tactgcgacaagtgctacgtcaaagagcaaagcacacgactcaaccaagtggcacatcgc
acaccacactcccctcctctggtcatgcgtgaccgagcagccaaacctagatcttcacag
caatcccagacccagacccagactcagtgccggcggagtggctgcagtaatgtgtcccca
ggttgcacagacctctgcccagagtgccacacacgtggccagggtagagaggcgggcagg
cgggcgcaggcgcccaaggaaaagtccaagcaacggtgccggacgcagggctgcgaccac
tacgccaaccaagagaaacagggctactgcaatgagtgtgaccacttcaaacagatttac
cgcggctga
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