Siniperca chuatsi (mandarin fish): 122884854
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Entry
122884854 CDS
T08948
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122884854 (ret)
04020 Calcium signaling pathway
122884854 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
schu01001
]
122884854 (ret)
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122884854 (ret)
Protein kinases [BR:
schu01001
]
Receptor tyrosine kinases (RTK)
RET family
122884854 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
ABC1
Motif
Other DBs
NCBI-GeneID:
122884854
NCBI-ProteinID:
XP_044071231
LinkDB
All DBs
Position
LG11:8329869..8349388
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AA seq
1108 aa
AA seq
DB search
MGSSCGFSRGNIVVVVVLLLLEGATGLYVPQNEYIETVYVGQPAGTPVLQVHAMLDSSSE
QPHFYLCWRSLRHLAYSTWFNLDINTGILSLNKTLEESDFALIYQKSWSVKKLFLHAVVL
PNFTKKPQCINSPRITLDFVNATMPQCAQTDKKELCFPHRDTSKPHIMENRFPGALRQLR
RLTRLNVCPNYTISYNVESDTPAPFAVNENTTELVVTAPLDREESECYRLLLVCTVRTET
VITKVETSLDVFVNDEDDNAPYVNGTDTADIIISFNRTKGGTFGTLFVFDRDLTPIYPIN
QSHNKYVGSLLSSDPWIKETFYVKGTFSEKKAARGGIRETVHAYQLVLKRNLYVTENRTL
QLDYVVNDTMYPGLEGTVLLHFNVTILPVHIQFSNITHMFTLTRRASVYAQVGRVCVENC
QQFDGFSVTYRLEVPDKNVSADVQSCYAAVSITQAPDEIWGLLYVNDSEALRRPECQDLQ
YLVVAQEEHTQLEASTQIHIILDGEANKASQKNQQFLSCAENRRRGDCESVRGLGATTGR
CQWRQGSEKGISENYSTCSPDLRTCPDSFCDAVESKDISICPQDCTKENVIGGHERGLRN
GIQAGYGTCYCYSESCFCEKEDVEEAICDDMCKTIIATALLLSFIVSILLSSYFIHRYHK
NSPKPPIASAEMTFRRPAQAYPISFPANNLRRGSQESIETDTFKIPEDPKWEFPRKNLVL
GKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHPH
VIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGRDSNRNSSYLENPDDRAL
TMGDLISFAWQISRGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV
KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKT
GYRMERPENCSEEMYNLMLRCWKQEPDKRQTFSDISKELEKMMVKSRDYLDLAASTPADA
LLYDDALSEEDTPLVDCNNTPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRHDATNPV
FTRYANDSVYANWMALPSPAKAVDKLDS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaagttgtggtttctctcggggaaacatcgttgtggtggtggtgctgctgctg
ctggaaggagcaacagggctgtacgtccctcagaatgagtacattgagacggtgtacgtt
ggccagccagcagggacgccggtcctccaggtccacgccatgctggacagcagctctgag
cagccgcatttctacctgtgctggaggtctctcagacatctagcctacagcacctggttc
aacctggacatcaacactggaatactgtccttgaataaaaccctggaggagagcgacttt
gccttgatatatcaaaagtcatggtctgtgaagaagttgttcctgcatgccgtggtgtta
cctaacttcaccaagaagccacagtgcatcaactcccctcggatcaccctggactttgtc
aatgctacgatgcctcagtgtgctcagacagataaaaaggaactatgcttcccgcacaga
gacacctccaaaccccacatcatggagaacaggttccccggggccctgcggcaactccga
cgtctaaccagactcaacgtctgccccaactacaccatctcttacaatgtggagtcagat
accccagcaccatttgctgtcaatgagaacaccacagagctggtggtgaccgctccgttg
gaccgcgaggagagtgagtgctacagactcctgctggtttgcacagttcgcacagaaacg
gtcatcaccaaggtggaaacttcactggatgtttttgtcaatgatgaggatgataacgca
ccgtacgtgaatggaacagacacagcagatattatcatcagcttcaatcggacaaagggt
ggcacttttggcactttgttcgtctttgacagggatttaacccccatctatcccataaac
cagagtcacaataagtatgtggggagcttgctcagtagtgacccatggataaaagaaaca
ttttacgttaaaggcaccttcagtgaaaagaaagctgctcgtggaggaattcgagagacc
gtccacgcctaccagcttgtcctgaagaggaacctgtatgtgactgagaatcgcaccctg
cagctggactacgtggtcaatgacacgatgtaccccggtctagagggaacagtgttgctg
cacttcaacgtcaccatcttaccggtccacatccaattctccaacatcacacatatgttc
acattgacacgcagagcttctgtttatgcacaggttggcagagtctgtgtggaaaactgc
cagcagtttgatggcttcagtgtcacataccgccttgaggtgccagataagaacgtgtct
gctgacgtgcagtcctgctacgcagccgtgagcatcacccaggccccagacgagatatgg
ggactgctctatgtgaacgactctgaggcgctgcgcaggcccgagtgccaggacctgcag
tacctagttgtagctcaggaggagcacacacagctggaggccagcacgcagatccacatc
atcctagatggtgaagcaaacaaggccagtcagaagaaccagcagttcctgtcctgtgca
gaaaacagacggcgaggcgactgtgagtctgtccgaggcctgggggccacaacagggaga
tgccagtggaggcaaggcagtgaaaaaggaatatctgaaaattactcgacctgctcccct
gacctgcggacatgtccagatagcttttgtgatgcagttgaaagcaaagatatatcaata
tgcccacaagactgtacaaaggaaaatgttatcggaggtcatgaacgaggcttgaggaac
gggatccaggctggctatggaacctgctactgttactctgagagctgcttctgtgagaag
gaagatgttgaggaggcgatatgcgacgacatgtgtaagaccatcattgccacggctctg
ctcctctccttcatcgtctcgatcctcctgtcctcatacttcatccaccggtaccacaaa
aactcacccaagcccccgattgcgtctgctgagatgactttccgccggccagctcaggct
taccccatcagcttccctgctaacaacttacgccggggctcgcaggaatccattgagacc
gacacctttaaaatacctgaggatcctaagtgggagtttcctcgtaaaaaccttgtactt
ggcaagactttaggagaaggagagtttgggaaagttgtcaaggcaacagcattcaggctg
aaaggaaaagctggttacaccactgtggctgtgaaaatgcttaaagaaaacgcctcccac
agtgagctgcgtgacctcctgtcagaattcactttactgaagcaagtcaaccatccgcat
gtcataaagatgtatggagcatgcagccaggacggtccattgtatctgattgtggagtac
gccaagtatgggtcactccgcaacttcctgcgcgagagtcggaaagttggcccgagctac
atgggcagggactccaaccgaaactccagctacctggagaacccagacgacagggcgctc
accatgggcgacctgatctcctttgcatggcagatctccagaggcatgcaatacctggcg
gaaatgaagcttgttcacagggaccttgcagcgcgaaatatcctcgtagctgaaggacga
aagatgaagatctcagactttggcctttccagggatgtgtatgaagaggactcatatgtt
aagaggagcaagggccgtatacctgttaaatggatggcaatagaatccttgtttgatcac
atttacacaactcaaagtgacgtctggtcctttggtgtgctgttgtgggagatagtgact
ctgggaggaaatccatacccaggtattgctcctgaacgcctctttaacctgctcaagact
ggctacaggatggagagaccagagaactgctcggaggaaatgtataacctgatgcttcga
tgctggaaacaagaaccagacaagaggcagacattctcagacatcagcaaagaactggaa
aagatgatggtgaaaagtcgggattacctggacctggctgcgtccacgccagctgacgcc
ctgctgtacgacgacgccctctctgaagaggacacaccactagtggactgtaataacacc
cctctccctcgaaccctcccctccacatggattgaaaacaagctctatggcatgtcatac
ccgaactggcccgagaagagcccggtaccgctcaacagacatgatgccactaatccagtc
tttacaagatatgccaatgatagtgtttatgcaaactggatggctttgccttcacccgca
aaagctgtggacaagcttgatagctaa
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