KEGG   Siniperca chuatsi (mandarin fish): 122885323
Entry
122885323         CDS       T08948                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122885323 (kdm6a)
Enzymes [BR:schu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     122885323 (kdm6a)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     122885323 (kdm6a)
   Histone demethylases
    122885323 (kdm6a)
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_17 TPR_8 TPR_12 TPR_16 TPR_19 TPR_9 TPR_11 TPR_CcmH_CycH TPR_7 RPN7 ANAPC3
Other DBs
NCBI-GeneID: 122885323
NCBI-ProteinID: XP_044072177
LinkDB
Position
LG12:complement(26858201..26902397)
AA seq 1460 aa
MKSCGVSLTAAASAAARSLGVAGNDEEKMASGTATEIEEDFPKLTAQEKESLVGTDSSLF
GFHRLQEDGARTKALLLKAVSCYDALILKAEGKVDPDIFCQLGHFNLLLEDYPKALSAYQ
RYFSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPGFSRAKEIHLRLGLMF
KVNTDYESSLKHFQLALIDSNLCTLSKAEIQFHIAHLYEIQKKYRAAKEAYESLLQTENL
PAQVKATTLQQLGWMHHTVEQLGDKGTKDSYAIQCLQKSLEADPNSGQSWYFLGRCYSSI
GKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWMD
LGTLYESCGQPHDAIKCYINATRSKACLNTAALTQRIKLLQAQLCNLQPGSLQNKSKMLP
SIEEAWSLPIPAELTSRQGALNTAQAQQACKGEGGQSASNHTDPQASPAKKKRTGSPAKG
VADSWTNSPNQQQIPSWYLTPQKLQHLDHLRTNRANLKPPQVQMLEQLENQFSLMQQHQQ
QMRQQAAAGGQPRPILPNGPLAESSHHHAGLSRTSPLNHAAIRPPCVTQPTANGSCSSSP
SAGLLGHVEKNHTLGLGGGGASNGNVPYPQQNSLPHNCTAASHPSTSSTTSSPSHADETW
RSQQGITTTQGLQKGPGSHSAGPNGEPPFSSSSSPQTSFSSSGILNQVGHSSGPCTASSS
ASSLSPTSPQTTPNHLSSPPHSTTTSGVHTKDTTPSGGNNGSNGAAATLPSGPETAVRHS
AGTPLSPSTTPAQGLTNHVQPRVTDSSASPSQPGSPAPSVLSSDNPQLSALLKGKANTTS
NDDNNNYSNHGGPSSEKINNVHPGLHGAAVPMSEQSVASSPLLATATPSPRSADPHTTNS
LSCLNSPSNTNSQGPTVNGKGLEDSQSPLKLEPLGAHKHTVAAGLAPWSSVSIYPSSSEV
LKACRNLGKNGLSTSSILLDKCPPPRPPCPPSPPLPKDKLNPPTPSIYLENKRDAFFPPL
HQFCTNPSNPVTVIRGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLAQPTDENWDPSG
SRKMWRCESSRSHTTIIKYAQYQASSFQESLREENEKKKEVEAEAGSSDSVMRRRKGSFK
HIKFGTNIDLSDEKKWKPQLQELSKLPAFARVVSAGNLLSHVGHTILGMNTAQLYMKVPG
SRTPGHQENNNFCSVNINIGPGDCEWFAVPETYWGVINDFCEKNNINFLMGSWWPNLEDL
YETNVPVYRFIQRPGDLVWLNTGTIHWVQAIGWCNNIAWNVGPLTAYQYKLAVERFEWNK
LQSVKSIVPMIHLSWNMARNIKVSDHRLFEMIKYCLLRTLKQCQMQRELLLAAGKELVWH
GRTQSEPAHYCSICEVEVFDLLFVTTESNSRKTYVVHCQDCARRGSTNLDNFVVLEQYKI
EDLMQVYDQFTLASPLPSSS
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcacagccgctgcctctgctgctgcccggagtctcggc
gttgctggtaatgacgaggagaaaatggcgtcgggaacagcgactgaaatcgaagaggac
tttccgaagctaacagcgcaagaaaaagagagcttggtcggaactgacagttcactgttt
ggatttcataggcttcaagaagatggcgccagaacgaaggccttgctgttaaaggctgtt
agctgctatgatgccctcatcctgaaagcagaggggaaagtggaccctgacattttctgt
cagctgggccacttcaacctcctgctggaggactatccaaaagcattatccgcataccag
aggtacttcagtttacagtcggactactggaagaatgctgcctttttatatggccttggc
atggtttacttccattacaacgcatttcagtgggcaatcaaggcattccaggaggtgctt
tacattgaccccggtttctcaagagctaaagagattcacctgagactgggactaatgttc
aaagtcaacacagactacgagtcaagtttaaagcattttcagctggctttgatcgactcc
aatctctgcactttgtctaaagctgaaattcagttccacattgctcatttgtatgagatc
cagaagaaatacagagcagcgaaagaagcgtatgaaagtctgttgcagacggaaaatctt
cctgcacaggtgaaggcaaccacactgcaacaacttggctggatgcatcacacggtggag
cagctgggggataaaggcaccaaggacagctatgccatccagtgtctgcagaagtcttta
gaagcagacccaaattctggccagtcctggtactttctcggcaggtgctactccagtatt
gggaaggtacaggatgccttcatctcttaccgtcagtccattgataagtcggaggccagt
gctgacacctggtgctccataggggtgctctaccagcagcagaaccagcctatggatgca
ctgcaggcctacatctgtgctgttcaactggaccacagccacgcggctgcctggatggac
ctcggcaccctctacgaatcctgtggccagccgcatgacgctatcaagtgctacatcaat
gctacacgcagcaaggcctgcctcaacactgctgcactcacacaacgcatcaaactgctg
caggctcagttgtgtaacctacagccaggtagtctgcagaataagagtaaaatgcttcct
agtattgaggaggcgtggagcctacccattcctgctgagctcacgtccaggcagggggcc
ttgaacactgcacaggcacagcaggcctgtaagggggagggaggccaatccgccagcaat
cacacagacccacaggccagtcctgccaaaaagaaacgcactggcagcccagctaagggt
gttgcagactcgtggactaacagccccaatcaacagcagatccccagctggtacctaacg
ccgcagaagctgcagcacctggatcacttgcggaccaaccgagcaaacctcaagcccccc
caggtgcagatgctggagcagttggagaaccagttctctctcatgcaacaacatcagcag
cagatgaggcagcaggcagcagcgggtggccagccacggcccattcttcccaatggtcct
ttggctgagtcctctcaccaccatgcaggcctctcccgcacctcccccctcaatcacgca
gccatccggcccccgtgtgtcacccagcccacagccaacggatcctgttcttcaagtcct
tcagcggggctgctgggacacgtggaaaaaaatcacaccctgggactgggaggtggtggc
gcgagcaatggaaacgtgccttacccgcagcagaattctctacctcacaactgcacagcc
gccagtcatcctagcaccagcagcactaccagtagtcccagtcatgcagatgagacatgg
aggagccaacaaggcatcactaccactcaggggcttcaaaaaggtccaggttcacattcg
gcaggtcccaatggagaaccccctttctcttcctcctcctcccctcagacctcattctct
tcctctggcattctgaatcaggttggacattcctctgggccctgcactgcctcctcctca
gcatcctctttatcccccacctctccccagaccacacccaaccacttgtcctcgcctccc
cactccactactacctcaggggtccacaccaaagacaccacgccttcagggggcaacaac
ggcagcaatggtgcagctgccactttgccatcaggtccggagaccgctgtcaggcattcc
gcagggacacccctaagtcccagcaccacccccgcgcagggattgactaatcacgtccag
ccgcgggtgacggacagctctgctagcccgtctcagcctggctctcctgcccccagcgtg
ctcagttcagacaatcctcagctctcagccttgctaaagggaaaagccaatactaccagt
aatgacgataacaataactacagtaaccacggagggccttcctcagagaaaatcaacaac
gtccacccgggtctccacggtgccgccgtgccaatgtcggagcagtcggtggcatcctcg
ccgcttttagccactgctacgccctctccacgctcagcagaccctcacaccaccaacagc
ctctcctgccttaacagcccctccaacaccaacagccaggggcccacagtcaatgggaag
gggctggaggactcccagagcccactgaagttagagcctttaggagctcataaacacact
gtcgctgctggtctggcaccctggtcctcggtttccatctaccccagctccagtgaagtg
ctcaaagcatgcaggaacctggggaagaacggcctgtcgactagcagcatcctcctggac
aagtgccccccgccgcgacccccttgcccgccctctcctccactgccaaaggacaaactc
aatcctccaacacccagtatttatctagaaaacaagagggatgccttcttccctccactc
catcagttctgcaccaacccttccaacccggtcaccgtcatcagaggactggccggagca
ctcaaactagatctgggcctgttctccacgaaaacattggtggaggccaacccagaccat
ctggtggaggtgcggacccagttggctcagcccactgatgagaactgggaccccagcggc
agcaggaagatgtggcgctgcgagagcagtcgctcccacaccaccatcatcaaatacgcc
cagtaccaggcctcctccttccaggagtctctacgggaggagaatgagaagaagaaggag
gtggaagcagaagcaggttcctcagacagtgtgatgcggcgcaggaaagggtctttcaaa
cacataaagtttggcaccaacattgacctctctgacgaaaagaagtggaaaccgcagctt
caggagttgtctaaactgccagcttttgccagggtggtgtcagccggcaacctgctcagc
catgtaggacacaccatcctgggcatgaacactgcccagctctacatgaaggttccaggg
agcaggacaccaggtcaccaggagaacaacaatttctgttcagtcaacatcaacattggc
cctggggactgtgagtggtttgctgtgcctgaaacgtactggggtgtcatcaacgacttc
tgtgaaaagaacaacatcaacttcctgatgggttcctggtggcccaacctggaggacctg
tacgagaccaacgtgcctgtttatcggttcatccagcgtcctggagacttggtgtggctc
aacacgggcactattcactgggttcaggccattggctggtgcaacaatattgcgtggaat
gttggccctctcacagcctatcagtacaagctggcagtggagcgttttgagtggaacaaa
ctgcagagtgtcaaatccatcgttcccatgatccacctctcctggaacatggccaggaac
atcaaagtgtcggaccacagactctttgagatgatcaagtattgtttgttacggactctg
aagcagtgtcagatgcagcgggaactgctgttggctgctgggaaagaactggtgtggcac
gggaggacccagagcgagccggcacattattgcagcatctgtgaggtggaggtgttcgac
ctgctgtttgtaaccaccgagagcaacagcaggaaaacttatgtggtgcactgccaggac
tgtgcccgtagggggagcactaacctggacaacttcgtggtgctagagcagtacaagata
gaggacctcatgcaggtttatgaccagttcacactcgcgagtccccttccttcctcctct
tga

DBGET integrated database retrieval system