Siniperca chuatsi (mandarin fish): 122885492
Help
Entry
122885492 CDS
T08948
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122885492 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122885492 (gli2a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
122885492 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
122885492
NCBI-ProteinID:
XP_044072545
LinkDB
All DBs
Position
LG12:2758249..2846304
Genome browser
AA seq
1515 aa
AA seq
DB search
METSAPTATEKECKGSGLDGSSFSEIPKKPSPTTLTRGAHHLFPTFHTPIPIDMRHHEGR
YHYEPHPLHAMHGPPGLTGSPVISDISLIRLSPHAAPGTGESPFSPPHPYVSPHMEHYLR
SVHGSPTLSMISAARGLSPAEVTHEHLKDRALFNLPPPPPGANPAEYYHLMASASQRSPY
TDLLMQSSAAAAAAAAAAAHLPDYISPVDVSRFSSPRLTPRLSRKRALSISPLSDASIDL
QTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFSFPHPINPVAYQQLLSQQRG
LNAFGHTPPLIQPSPSSFSARPHPLTASPMSTSHNSSNSEANQNASGDPAVSSTVNPLTT
KRSKVKMEAEGPLPISPSSQDHGGGILDLSEDLDKDECKQEPEAIYETNCHWEGCTKEYD
TQDQLVHHINNDHIHGEKKEFVCRWQECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEG
CSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIP
GCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRSDAPPRLQPPKGNGENEANSKLGARGVDG
KIEAISTSRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEPSPLSSANNNDSGVEMAMH
SGGSFGDLSAQDECPMVDSTVPAGGQQAGMGLQLRKAVGHGGVVTIKLENIKKERLKTVR
DSCPWVNAAPQPLQGQHNSMKLPPIPAVGSLLESSNVMSNLSGLYPGQRIGDLSSCEVTL
LNQLNERRDSTTSTISSAYTLSRRSSGISPCYSSRRSSEASQFGANRHNNISSADSYDPI
STDLSRRSSEASHCGGGGVSGGGGLPSLLSLTPAQHYRLKAKYAAAIGGAPPTPLPNMDR
MSLRTRMALFSDSQEVSSHPFHQPPSGTVPRRCSDIGYGTQSMMPHEVPTNLPRRASDPV
RRPTLDPLSFPRVQRYNSMNSMNPMNGPSAERHQALALQGYTRSDGSLQRYPFAPRPPSI
SENVAMENMAVDGMMIGGEQNGEDDMVLPDDVVQYLRSQNSGPSGHNSGRVDYHSNNQTQ
GYQTGMAPPASFYAQRRMAMVDATMTQSGQDMQSCHMGPGGSQQSFSAPSDNMNKNNMPV
QWNEVSSGTVDTTTKLSKQQHPFRGNLAVVQQRHNFGSFPGQGQGLGSNQQVVPMSQNMS
MQGYVNHNSQKLMNISHQQHQQQRQCNNLNVSEQMSPQQGFGQEAIPNSISGSTSVRPTR
NSMADPELQSYGARTQADGYSHVNQVDQQQNYSVLSQHNIHNGGRGMLQPRPPTEPKSIA
RQHTGSSLMQPSRIPKSSDLSPSRGTDTSEASPKRPSGSAAHNSNSENPNSAVCYTGQIQ
MFEPTSVSFDAPMSPCASQAPASNTTAAASMASPGVNQVSSSTVDSSTGGSGGTEHAQID
FDTMLDDGDHSSLMSGTLSPGLLQSLSQNSSRLTTPRNSVTLASVPAGIGNMAIGDMNSM
LTALAEESKFLNMIS
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggagacttcagctccaacagccactgagaaggagtgtaagggttcaggtctggatgga
agcagcttctcagaaatcccaaagaagccctcgcctaccactctgaccagaggtgcccac
cacctcttccccacgtttcacacacccatcccaatcgacatgagacaccacgaggggcgg
taccattatgagccacacccactccatgccatgcatggacctccaggactgacgggaagt
ccagtcatctcagatatttccctgatccgtctatcaccccatgcggcgcccgggacgggt
gagtcaccgttcagccctccacatccttatgtcagcccccacatggagcactatctacgc
tcggtacacggcagccccaccctctccatgatctcagcggcccgaggactgagccctgca
gaagtgacccacgaacacctgaaggatcgtgccttgttcaatctcccccctccaccacca
ggggccaaccccgcagaatactaccacctgatggccagtgccagccagcgaagcccctac
actgacttgctgatgcagagcagtgcggccgccgccgctgctgctgcggccgccgctcat
ctaccagattacatcagccccgtggatgtatcacgtttctccagcccacggctgacaccc
cgactgagcaggaagagggcgctgtctatctccccgctgtcagatgccagcattgacctg
cagaccatgatccgcacctcacccaactccctggtggcctacatcaacaactcccgctcc
agctcggccgccagcagctcctatgggcacctttcagtcggcgggatcagcccctccttc
agcttccctcatcccatcaacccagtggcataccagcagctgttgtcccagcagaggggt
ctcaatgccttcggccacacacctcctctcattcaaccatcgccgtcctctttctctgct
cgcccacaccccctcactgcttcacctatgtccacctcccacaacagctccaactctgag
gcaaaccagaacgccagtggagacccagcagtgagtagcacagtcaacccgctgaccacc
aagaggtcaaaggttaagatggaagcagagggtccactgccaatctcaccatcctctcag
gaccatggtggggggatcttggacctgagtgaggatctggataaagacgagtgcaaacaa
gagcccgaggccatatatgagaccaactgccactgggagggctgtaccaaggagtatgac
acccaggaccaacttgttcatcacatcaacaacgaccacatccacggtgagaagaaggag
tttgtgtgccgctggcaggaatgttcacgggagcagaagcccttcaaggctcagtacatg
ctggtggtccacatgagacgtcacacaggggaaaagccgcataaatgcacatttgagggc
tgttcaaaagcttactctcgcctggagaacctcaagacccacctcaggtcccacaccggg
gagaagccgtacgtgtgtgaacatgaaggctgcaacaaggccttctccaacgcctcagac
cgggccaagcaccagaaccgcacacactctaacgagaaaccatatgtgtgtaagatccca
ggctgtaccaagcgctacacggaccccagctctctcaggaagcatgttaagacagtccac
ggacccgaagcccacgtcaccaagaaacaacgaagcgacgcaccgccgagactgcagcca
cccaaaggcaacggggagaatgaggcgaattctaagcttggtgcaagaggcgtggacggc
aagattgaggccattagcacctcaagaggagtggaagactgcctgcaagtcaaatctatc
aagactgagaactctatgacatatcagtccagtcctggcggccactcgtcatgtagcagt
gagccgtcgcctctaagcagcgccaacaacaatgacagtggggtggagatggccatgcac
agtgggggcagcttcggggacctaagtgcacaggatgagtgccccatggttgactccact
gttcccgctgggggacagcaggctgggatggggcttcagttgaggaaagccgtgggtcat
ggtggcgtggtcaccatcaagctggagaacatcaagaaggaaaggctgaagacagtgagg
gactcctgcccctgggttaacgctgcaccacagccactgcagggccaacacaacagcatg
aagctgcctcccatacctgcagtcggttccctgcttgagagctccaacgtgatgagtaac
ttgagcggtttgtatcctggccaacgcataggtgacctgtcttcatgtgaagtaacactg
ctgaaccagctgaatgagcgccgtgacagcaccaccagcaccatcagctcagcttacacc
ttgagtcggcgctcctccggtatttcaccctgctattccagccgccgctccagtgaggca
tcccagtttggtgctaaccgccacaacaatatcagttcagctgactcctatgacccaatc
tccactgatctgtctcgccgctccagcgaggccagccactgtggaggtggtggtgtcagt
ggaggaggaggtctccctagcctccttagtctgacaccagctcagcattatcggctcaag
gcaaagtacgctgctgccattggtggagctccacctactcctctccccaatatggatcga
atgagcctgaggacccgcatggcactcttcagtgactcccaggaagtctcgtcgcaccca
ttccatcagccaccctctggaactgtgcctcggcgatgcagtgatattggatacggcaca
cagagcatgatgccccatgaggtacccaccaaccttccacgccgtgccagtgacccagtg
cgtcgtcccacactggaccctctctcctttccaagggtccagcgctataacagcatgaac
agcatgaaccccatgaatggtccatcagctgaacgccaccaggcactggctttgcagggt
tacactcgctctgatggcagcctgcaacgctacccattcgcccccagaccacctagcatt
tctgagaatgtagccatggagaacatggcagtagatgggatgatgattgggggggagcag
aatggggaggatgatatggtgcttccagatgatgtggtgcagtacctcaggtcccagaat
tctggcccctcaggtcacaactcggggcgagtggactaccattccaacaatcagactcag
ggctaccagacaggcatggccccaccagcatcattttatgcacagaggaggatggccatg
gtggatgccaccatgactcagtctggtcaggacatgcaatcctgccatatgggtccaggt
ggctcccagcagtccttctcagcaccatcggacaacatgaacaagaataacatgccggtg
caatggaacgaggtgagctcagggactgtggacaccacaactaagctctccaaacagcag
catccttttagggggaacctagctgttgttcagcagaggcacaattttggttccttcccg
ggacaaggacagggcctgggcagcaaccagcaggtagttcctatgagtcagaatatgtct
atgcaggggtatgtgaaccacaacagccagaagctgatgaacatctctcaccagcagcat
cagcaacagaggcaatgcaacaatttgaacgttagtgagcaaatgagtcctcagcaaggg
tttggccaagaggcaatcccaaattctatatctgggagcactagcgtgagacctacccgg
aacagtatggcagatccagagctgcaaagttacggagcaaggacacaggctgatgggtac
tctcatgtgaaccaagtggatcagcagcaaaattacagtgttctctcccagcacaatatc
cataatggaggccgaggaatgttacaacccaggcctcccacagagcccaagtctattgca
agacagcacacagggtctagcttgatgcaaccgagccgaatacccaagtcatctgatttg
agccccagtcgtggtactgacacctcagaagcaagcccaaagaggcccagtgggtcagca
gcccataacagcaactctgaaaatccgaactctgctgtttgctacacaggtcagattcaa
atgtttgagccaacttctgtcagctttgatgcccccatgtccccctgtgccagccaggct
cctgccagcaacaccactgctgcagccagcatggcctcaccaggagtcaaccaggtctcc
agcagtacggtagattcttccactggtggatctggtggcacagagcatgcccagatcgac
tttgacaccatgctagatgatggggaccactccagtctaatgtcaggcaccctgagtcct
ggccttctgcagagcctctcccagaattcctcacgtctcaccaccccccgcaactctgtc
accctcgcgtctgtaccggcagggattggcaacatggccatcggtgacatgaactctatg
ctcacagccttggctgaagaaagcaagttccttaacatgataagctga
DBGET
integrated database retrieval system
