Siniperca chuatsi (mandarin fish): 122885801
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Entry
122885801 CDS
T08948
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122885801 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
schu01007
]
122885801 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schu03016
]
122885801 (iars1)
Enzymes [BR:
schu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122885801 (iars1)
Amino acid related enzymes [BR:
schu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122885801 (iars1)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122885801 (iars1)
Prokaryotic type
Other AARSs
122885801 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
PriX
Motif
Other DBs
NCBI-GeneID:
122885801
NCBI-ProteinID:
XP_044073390
LinkDB
All DBs
Position
LG2:13521070..13577519
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPESINFPSEEEKIMQLWQEKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWENSVKRMGRWIDFRNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFEAHQNYKDVQDPSVIVNFPMVENEDVAFIAWTTTPWTLPSNLALCVNP
EFLYVKVKDNATDKTYIMMEARLGALFKSENEYTLLDKFPGKTLKGKKYKPLFQYFAKCG
EKGAFQVVMDNYVKEEEGTGVVHQAPYFGADDYRVCTEFNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKEKGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNGKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGVKVTDLHRESIDSLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQVHY
PFENKKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPALVVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIRFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDTYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDISSIHYLMLPQVRESVIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALEDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAVTASIKELTSEQLESFQKTGSIIVDGHELHEEDLRLMYTFNQSSGSAAQ
YEAHSDAQVLVLLDVTPDQSMLDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCQPEGE
YLDSVIQAHTDFILATTKAPLLPFPAPKTASVIIEEKTQLKGSDLELTIVKGSSAPRALL
NGPACTYVNIRVKVNNKEQEGVVLLENPKGDNRLNLDKLKNVCSSIFGTNNTMLRFFDSG
TELTSKIDLQALSGKTLSVTSGSSSPGPAPATDTILCPYVNLLLCNAQPSECQTGEMGTL
LLVNPVGQNGLDYSGLLSEAAKVFGLRSRRLKLYLDQDLTQELSADSSVKSLDTKTLFVR
VLPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagttcctgagtccatcaactttccctctgaggaggagaagatcatgcag
ttgtggcaagaaaaggactgcttccaggaatgcctcaaacagtccaagaacaggcccaag
tataccttttacgatggccctccttttgccacgggtctaccccactatgggcacattcta
gctggcaccatcaaggacattgttactcgctttgcacaccagagcggcttccatgtggac
cgacgctttggctgggactgtcacggcctgcctgtggagtatgagattgacaagactttg
gggatcaaagggcctgaagatgtggccaagatgggcatcgctgagtacaacaagcagtgc
agaaacattgtcatgagatactccaatgagtgggagaattcagtgaagcgaatgggaagg
tggattgacttcaggaacgactacaagactctctacccatggttcatggagactgtctgg
tgggtgttcaaacagctgtacgacaagggtctggtttaccgaggtgtcaaagtcatgcca
ttctccactgcctgcaacactcccctgtccaactttgaggcccaccagaactacaaggac
gttcaggacccgtcggtgatcgtgaacttcccaatggttgagaatgaggatgtggctttc
atcgcctggacgaccacaccctggacactgccaagcaacctggccctctgtgttaacccg
gagttcttgtatgttaaggtcaaagataacgccacagacaagacctacatcatgatggag
gccaggctgggagctctgtttaagtcagaaaacgagtacactctcctggacaaatttcct
ggcaagacgctgaaaggaaaaaaatacaagcctcttttccagtactttgccaagtgtggg
gagaaaggagcgttccaggtggtgatggataactacgtcaaggaggaagagggcacagga
gtggtccaccaggcaccttactttggagctgatgattacagggtgtgcacagaattcaac
atcatccagagggaccaggctcctatctgccctgtggacgcctcgggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagatgctgacaagaatatcatcaagtgg
ctgaaggagaagggtcgtctcgtcaatgccagcagtttcaaacatagttaccccttctgc
tggaggtctgacacgcccctgatctacaaagccgtccctagctggtttgttcgagtggag
cacatggtggagaaactactggaaaacaatggcaaatgctactgggttccagagtttgtg
cgtgagaagcgtttcgggaactggctgagagatgcacgagactgggccatttcgaggaac
cgttactggggaacaccgatccctctctgggtcagcgacgactttgaggaggtggtgtgt
gtcgggtccatggctgaactggaggaactgacgggagtcaaagtaactgatctgcatcgg
gagagtattgacagtctgacaatcccatcacggtgtggtaagggtgtgctgcggagggtc
acagaggtgtttgactgctggtttgagagcggcagcatgccttacgcccaggtccattac
cccttcgaaaacaagaaggagtttgaggacactttcccagctgacttcatcgctgaaggc
attgaccagacgaggggatggttctacaccctcttggtgctttccacagcgctgtttggc
aaaccgcccttcaagaatgtcattgttaatggattggtactcgctagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccagcactggtagtgcagaactatggagct
gatgccctcagactgtacctcatcaactctcctgtagtgagagcagagaacctgcgtttc
aaagaggagggtgtgcgagacgtgttgaaggatgtcttcctgccgtggtataatgcctat
cgcttcctggtgcagaacgtacaaaggttacagaaggaggatgagattcggttcctgtac
aatgaaaacacggcgaagcagagtgacaacatcatggacaaatggattcagtcgttcaca
cagtccctcatccagttcttcaaggctgagatggacacttatcgcctgtacactgtcgtg
ccacgcctggtcaagtttgtggacatgctcaccaactggtacgtgaggaccaacagacgc
cgtctaaagggagagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctaatggctcccttcacacccttcattacagagatgatg
taccaaaatctgcgtcacctcattgaccccgcatctgttgaagagaaggacatcagcagc
atccactatctcatgctgccccaagtcagggagagtgtgattgacaagcgcattgagagc
gctgtctctcagatgcagtctgtgattgagctgggcagagtgatccgagacaggaagacc
ctgcccgtcaagtacccattgaaggaagtggtagttattcaccaggacccagaggctctc
gaagacatccagtccctgcagaaatacatcctggaagagcttaatgtgcgacagttgaca
ctgtcaacagacaaggacaagtacggtatccgtctgagagctgagccagaccacatggtg
ctgggcaagagactaaagggggccttcaaagctgtcaccgcttctatcaaggagctcacc
agtgaacagttagagtccttccagaagacaggatccatcattgtggatggccatgagctt
catgaggaggacctgaggctgatgtacaccttcaaccagagctctggctcagccgcacag
tatgaagcacactctgatgcacaggttctggtgctgctggatgtcaccccggaccagtcc
atgttggatgaaggcgttgcccgtgaggtcatcaaccgcattcagaaactacgcaagaag
ggccatttggtgccttcagatgagattactgtgtactaccgctgccagccagagggggag
tacttggactctgtgatccaggctcacactgactttatcctggctaccaccaaggctcca
ctgttgcccttccctgcccccaagactgccagcgtcatcatagaagaaaagactcagctg
aagggctcagacttggagttaaccatagtaaagggatcttcagcccctcgggctcttcta
aatggaccagcttgcacctatgtgaacatcagggtgaaggtcaacaacaaagaacaagag
ggggtggtgctgttggagaaccccaaaggggataacagactaaacttggacaagctgaag
aacgtgtgcagcagcatctttggaaccaataacaccatgctcagattcttcgacagcggg
actgagttgaccagtaaaatagaccttcaggctctaagcggtaaaactttgtcagtgact
tcaggctcttcctcccctggccccgcccccgccacggacaccatcctatgtccttacgtg
aatctgctgctctgcaacgcacaaccatctgagtgccagacaggagagatgggcaccctc
ctgctggtgaacccagtgggacagaatggcctcgactactcgggcctgctgtctgaggct
gccaaagtttttggcctccgcagcagacggctcaaactttacctggaccaggacctcacc
caggagctgtcagctgattcatcggtaaaatctttagacaccaaaactctgtttgtgaga
gttcttccaacaaccgccgaagcataa
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