Siniperca chuatsi (mandarin fish): 122887395
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Entry
122887395 CDS
T08948
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04217
Necroptosis
schu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122887395 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122887395 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122887395 (sharpin)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
122887395 (sharpin)
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122887395
NCBI-ProteinID:
XP_044076513
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Position
LG13:complement(13131824..13141486)
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AA seq
436 aa
AA seq
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MALSSGGWAPPAPVPASSQQAACDGPALTACCSTVLMSVRVSVCHSGIRPLCLPGAGSEA
LRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSPRCHEMRLAAPPHDCI
RFNFRCDREAEEWATVVMSSLREAHRVANINTCETDGRHNHTAAAMEQWSSASLPLAEEL
CLELARAIEAGDTEAASQHASALARQKAVLTIQLSEKNYVDGEIGLSVVVEDVSSSCCVT
VKVFPYMTVAALKEQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDTAYLYLIS
ARQARITRQLFQQDLESALLAPPLPPGNGPTSQGWRGYSTLPSRLPHNNQGSTGGGSDRP
GDIKDVLDIENLQLNDHTNKASKTQQCVWACPSCTFINKPSRPGCEICATARPDTHIQQE
KGRREDRGESGLSSSS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcgggcggctgggctcctccagccccggttcctgcctcgtcccaacag
gctgcatgcgatgggccagcgctgacggcttgctgcagcactgttttaatgtcagtacgg
gtttcggtgtgccattccgggatccggcccctgtgcctccctggagcaggcagcgaggct
ctgcgcctacagctcagcatggacccgagccgggccggagagttccgactggcgctgcga
gatacgagcggaaaccgcagtgtgttcattgcagagtttgacctgcgctcggtgcagtat
gaggtcaaatcacctcgctgccatgagatgcgtcttgctgctccgccccacgactgcatc
cgcttcaacttccgctgtgaccgtgaagccgaggagtgggccacagtggtgatgtcatca
ctaagagaggcacacagagttgcaaatattaacacatgtgagacagatggcagacacaac
cacacggcagcagctatggagcagtggagctcagcctcgctgccgctcgctgaggagcta
tgcttggagcttgccagggcgattgaagcaggtgacactgaagccgcttcacagcatgca
tccgctctggctcggcaaaaagcagtgctgacgattcaactgtctgaaaagaactacgta
gacggagagatcggtttatctgtggtagtggaggatgtttcgtcgtcctgttgtgtcaca
gtgaaagtctttccttacatgactgtggctgcactcaaggaacaggtgtttctcgagtat
ggcttccatcctcgggtgcagcgctgggtgattggtcagtgcttgtgcaccgagccgagg
tcactggcctcctatggggtgcagaaggacggcgacacagcgtacctctacctgatctct
gcacgacaagcccgcattacccggcagctgttccagcaggacctggagagcgccctcctc
gccccacctctcccaccaggcaacggccctacctcccaaggctggaggggttacagcacc
ctaccctcgaggctaccccacaacaaccaggggagcacaggtggaggaagcgatagacca
ggtgacatcaaagatgtcctcgacattgagaatctgcagctgaatgatcataccaacaaa
gccagtaaaacccagcagtgtgtgtgggcttgtccctcatgcactttcatcaacaagcct
tcccgtccgggctgcgaaatctgtgctacagccagacctgacacacacatccagcaggag
aaaggaaggagagaggatcgaggagagtctggtttaagcagcagcagctga
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