Siniperca chuatsi (mandarin fish): 122888453
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Entry
122888453 CDS
T08948
Name
(RefSeq) spectrin family protein isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04517
IgSF CAM signaling
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122888453
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122888453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122888453
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122888453
Intermediate filaments
Intermediate filament-binding proteins
122888453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
122888453
NCBI-ProteinID:
XP_044078850
LinkDB
All DBs
Position
LG14:complement(11439536..11493977)
Genome browser
AA seq
2378 aa
AA seq
DB search
MSTISPTDFDSLEIQQQYNDINNRWDLAAETDWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKD
ALLLWCQMKTAGYPNVNIHNFTTSWRDGLAFNAIVHKHRPDLIEFDNLKRSNAHYNLQNA
FNVAEKELGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRIGKVLDYA
IEADQLIEKYETLASELLQWIEQTIVTLNDRQLANSLSAVQNQLQAFNSYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGTDLGAVEAATRKHEAIETDIGAYWER
VAAVEAVAKELEAESYHDVRRITARRDNVLRLWEYLKELLAARRERLNAHRDLQRLFQEM
RYILDWMADMKGRLQSPDSGKHLHDVLDLLQKHTLVEADISAQAERIKAVQGAAKRFTSY
EQAYKPCEPGLVSEKVDLLGQAYEELGQLAGKRRERLEDSRRLWQFLWDVGEEAAWIREQ
EQILASGDCGRDLTSALHLLSKHEAFRDEMAARYGPLSNSIASGEALVKEGHFGAPEVTE
RIQDIRAQWTHLEETTKLREQSLKEAVALHQFQTDASDMEAWIMETLRQVSSQEVGHDEF
STQTLARKQREIEEEIQSHHPLIDSLHEQAQALPEAYVHFPQVDGRLPAIEQSYEELESL
SVARRQALEGALALYRMFSEAGACQLWVEEKEQWLHGMDIPTKLEDLEVVQQRFETLEPE
MNNLGTRVTDVNQVAEQLLSSDNCSKDQIHQTRDQLNNRWKEFEQLAGQKKQGLESALNI
QNYHLECNEIQSWMKEKTKVIESTQSLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLRN
EAEKLAKEHPDQAGEIQGHLAEIQEVWEELNATMKRREESLGEASKLQGFLRDLDDFQSW
LSRTQTAVASEDIPTSLPEAESLLAQHESIKNEVDNYKDDYEKMRAVGEEVTQGQTDAQY
MFLAQRLQALDTGWHELRRMWENRHSLLAQAFDFQTFLRDAKQAEAFLNSQEYVLSHTEM
PTSLQGAEEAIKKHEDFLTTTEASEEKITGVVEAGRRLINDCNANSDKIQEKVNSIQERH
FKNKEAANELLTKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKNWLDKIDKEGQALVAEKPELKPVVQQTLEDLQRQWEELEGTTRTKAQCLF
DANRAELFTQSCSALDVWLKNLESQLHNDDYGKDLTSVNILLKKHQMLEHQMEVREKEVQ
SLQSQAVALSQEDAGLAEVDGQQRRVTDNFSNLQEPLKLRRQQLLASKEAHQFNRDLEDE
ILWVKERMPLATSTDHGKDLPTVQLLIKKNQTLQKEIQGHQPRINDIHRRGKTQSQVDGE
RQSVLEERLVELRDLWDQLIAETDKRHARLIEANRAQQFYADAAEAEAWMGEQELHMMSE
EKAKDEQSALVMVKKHQSLEQALEDYAQTIHQLANSSRLMVTSEHPESERINLRQAQVDK
LYAGLKDLAEERCGRLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEHVTMLRD
KFREFARDTSTIGQERVDGVNGLADDLIESGHPENASVAEWKDGLNEAWADLLELIDTRT
QMLAASYELHRFHQDAMEVLGRVKEKREGLPSDLGRDLNTVQHLHRQHNTFENDIQALSG
QVNQVQDDAARLQKAYAGEKADDINRSEHAVTSAWEGLLEAGQTRRLLLLDTVEKFRFFN
MVRDLMLWMDGVNLQIDAHDSPRDVSSAGLVIANHQDIKSEIETRADSFTACFEMGNTLI
NNNHYAADEIREKLAQLQEKRDKINKKWQDKMDHLQIVLEVLQFGRDAYVAESWLAGQEP
LVRAAELGANVDEVESLIKRHEAFEKLAAAWEDRFVLLEKLTTLEEQEIQRRREEEERAR
RPPTPPPVEVVQSETESHAHDSAARTSLDQTTLNQSVSVNGVHSDNDTSQQSVSLSLSVG
KKSDPKRVCKPKQPERGSESESVNGPGRDSGLASSRLDPSATLPSRGGAESEPETMEGML
CRKQEMESHSKKAATRSWQNVYCVLRKGSLGFYKDGKSASNGIPYHGEVPISLGEAVCEV
ANDYKKRKHVFKLRLGDGKEFLFQAKDEVEMSSWIHSILSSIPTGSGDSPGGPRALSRAM
TMPPISPSSGDAGGVTMRNKDGKDKDREKRFSFFGKKK
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctcgccgacagactttgacagcttggagattcagcagcagtataatgac
atcaacaaccgctgggacctggcagcagagactgactgggataatgagaacagttcagca
cgcctctttgagcgctcacgcatcaaggctctcgcagatgagcgtgaagcagtacagaag
aagaccttcaccaaatgggtaaactctcacttaggccgagtgacctgtcgcattggtgac
ttgtacactgacctgcgcgatggccgcatgctaatccgccttctggaagtgctctcagga
gaacagttgccaaagcccactaagggccgcatgcgtatccactgcctggaaaatgttgat
aaagccctgcagtttctcaaagagcaaaaagtccatctagaaaacatgggctcacatgac
attgtggatgggaatcaccgactcaccctgggtctcatctggaccatcatccttcgcttc
cagatccaggacatcagtgtggagacagaggacaacaaggagaaaaaatcagctaaagat
gccctgctgctttggtgccaaatgaaaactgctggatatcccaatgtcaacatccacaac
ttcactaccagctggagagatggtctggcgttcaatgccatcgtgcacaagcacagaccc
gacctgattgagtttgacaaccttaagaggtccaatgctcactacaatctccagaatgct
ttcaatgtggctgagaaggaactggggcttaccaagctgctggacccagaggatgttaat
gttgatcagcctgatgaaaagtctatcattacctatgtggctacctactaccattacttc
tccaagatgaaagccctggcagtggagggcaaacgaattggcaaggtgctggactatgct
attgaggctgaccagctgatagagaagtatgagaccctggcctcagagctgctgcagtgg
attgagcagaccatagtgacgctcaatgatcggcagctagctaactcactgagtgccgtg
cagaaccagctccaggctttcaactcctaccggactgtggagaaaccccccaaatttaca
gagaaaggaaacttggaggttctcctttttactatccagagcaagatgagagcaaacaat
cagaaggtctacatgccaagagagggtaaactcatctctgacatcaataaggcatgggag
cgactggaaaaggcagagcatgaacgagagctggcactgagaaatgagttgattcgccag
gagaagctggagatgctcgctgcacgttttgaccgcaaagcggctatgcgggagacatgg
ctgagtgagaaccagaggctggtgtctcaggacaactttggaactgacttgggagcagtg
gaagctgccacgcgtaaacacgaggcaattgagacagacattggggcatattgggagcgt
gtggctgctgtggaggctgttgccaaagagctggaagcagagagttaccatgatgtgcgg
cgtataactgcccgaagggataacgtgcttcgactctgggaatacctgaaagagcttctg
gctgcacgcagagagaggctgaatgcccatcgtgacctacagagactgtttcaagaaatg
cgctacatcttggactggatggcagacatgaagggtcgtctacagtctccggacagtggc
aaacatttgcatgatgtgttagaccttctgcagaagcacactctggttgaggctgacatt
tcagctcaggcagagaggatcaaggcagtgcagggagctgcaaagcgcttcacttcctat
gaacaggcctataaaccatgtgagccgggactggttagtgagaaggttgacctgcttggt
caagcctatgaggagcttggtcagcttgctgggaagcgcagagagcggctagaggactcg
cgccgcctgtggcagttcctgtgggatgtcggagaggaggcagcttggatcagagagcag
gagcagatcctggccagtggagactgtggccgtgacctcacgtctgcccttcacctgctc
agcaaacatgaggctttcagggatgaaatggcagcccgctatggccccctgagtaacagc
attgcttctggagaagctttggttaaggagggacactttggagccccagaggtcactgag
aggattcaagacattcgtgcacagtggacacatctggaggagacaactaagctcagagag
cagagtcttaaggaagcggtggccctgcaccaatttcaaacagatgccagtgacatggag
gcatggatcatggagacacttagacaggtgtccagtcaggaggtaggccacgatgagttc
tccacccaaactctagctcgcaagcagagggagatagaggaggagatccagagccaccac
cccctcatcgactcccttcatgagcaggcacaggcactgccagaggcctatgtacatttc
cctcaggtggatggtcgcttgcctgctattgagcagagctatgaagaactggagtctctg
tcagtagctcggcgccaggctctggaaggtgctctggccctctaccgcatgtttagtgaa
gctggtgcctgccagctctgggtggaggaaaaggagcagtggttacatggcatggacatc
cctaccaagctggaggacttagaggtggtgcagcagagatttgagacactggaacctgag
atgaacaacctaggcactcgtgtcactgatgtgaaccaggtggccgagcagctgctgagc
tccgacaactgtagcaaagaccaaatccaccagacacgagaccaactgaacaacagatgg
aaggagttcgaacaactggctggtcaaaagaaacaaggcctagagtcggcccttaacatc
cagaactaccacttggagtgtaatgagatccaaagttggatgaaggaaaagaccaaggtg
attgaatccactcagagcctgggcaatgacctggctggagtgatggcactgcaacgcaaa
ctcactggcatggagagggacctggaggccattcagggaaaattggatgacctgagaaac
gaggcagaaaagcttgccaaggaacatccagatcaggctggagagatccaaggacacctg
gcagagattcaagaggtgtgggaggagttgaacgccaccatgaagcggcgtgaagagtca
ttgggcgaagccagcaaactgcagggcttccttagggatctggatgacttccagtcctgg
ctatcccgcacccagacagccgtggcctcagaggacattcccacctctctgcctgaggct
gaaagtttgctagcccagcatgagagtattaagaatgaggtggataactataaggatgac
tatgagaagatgcgggcggtcggtgaggaggtgacccaaggtcagacagatgcccagtac
atgttcttggcccagaggctccaggcactggacactggctggcatgagttgcgtcgcatg
tgggagaaccgccacagtcttttggcccaagcctttgacttccagactttcttgagagat
gcaaagcaggcagaggctttcctcaacagccaggagtatgtgctgtcccacacagagatg
cccaccagtcttcagggagcagaagaggccattaagaaacacgaggatttcctcactacc
acagaggccagtgaggagaagataactggtgtggtggaggccggacggcgcctcattaat
gactgtaatgcaaactctgataagatccaggaaaaagttaattccatccaggaaaggcat
tttaagaataaggaggctgcaaatgaattgctgacaaagcttaaggataaccgtgaactt
cagcacttcctccaagatggacaggagctcacattgtggatcaatgaaaagatgctgacg
gcacaggacatgtcttatgatgaggccagaaatcttcacagcaagtggcagaaacatcag
gccttcatggcagagctggcctccaacaaaaattggctagacaaaattgataaggagggt
caggcgctggtggcggagaagccggagctgaaacctgttgttcagcaaaccctggaggac
ctacagcgtcagtgggaggagctggagggcaccacccgcaccaaggcccagtgcttgttt
gatgctaaccgggcagaactctttacgcagagctgctccgctctggatgtctggctgaaa
aaccttgagagtcagctgcataacgatgactatggcaaagatttgaccagtgtcaacatc
ctgctcaagaagcaccagatgctggagcaccagatggaggtcagagagaaggaggtgcag
tccctccagtctcaggctgtggccctatcccaggaggacgctggactcgctgaggtagat
ggtcagcaaagacgtgtcactgacaacttctccaaccttcaggagcctctcaaactgagg
agacagcagctactcgcctccaaagaagcacatcaatttaacagagatctggaggatgaa
attctatgggtgaaagagaggatgcccctggcgacctccacagaccatggaaaagacctg
cccaccgtacagctgctaatcaagaagaaccagacattgcagaaggagatccagggccac
cagcctcgcatcaatgacatccatagacgaggcaagactcagagccaagtagatggtgag
agacagtctgtcctagaggaacgccttgttgagttgagggacctctgggaccagctgatt
gccgagacagacaagcgtcatgcccgtctaatagaggccaatcgcgcccagcagttctat
gctgatgcagcggaggcggaggcctggatgggagagcaagagctacacatgatgtcagag
gaaaaagccaaggatgagcaaagtgcattagtgatggtcaagaagcaccagagcctggaa
caggcacttgaagactacgcccaaaccattcaccagctagccaacagcagccgcctcatg
gtcaccagtgaacacccagagagtgagagaatcaacttacggcaagcccaagttgacaag
ctgtatgcgggtttgaaagacctcgctgaggagcgttgtgggcggcttcaagagagactg
cggctgacccagctgaagcgggaggtggatgacctggaacagtggattgctgagagggag
gtggttgctggctcccatgaactaggacaggactatgaacatgtcacaatgctgagggac
aagttccgggagtttgctcgtgacaccagcaccatcggccaagagcgtgtagatggtgta
aatgggttggcagatgacctgattgagtcgggtcatcctgaaaacgccagtgtggctgag
tggaaggacgggttaaatgaggcttgggctgatctgctggagctgattgacacacgcaca
caaatgttggcagcctcctatgagttacaccgcttccatcaggatgccatggaggtgctt
ggacgtgttaaggagaagagggaggggctgccttccgaccttggccgtgatctgaacact
gttcagcatctacacagacagcacaacacttttgaaaatgacatccaggccctaagtgga
caggtgaaccaggtgcaagatgatgcagcacggctgcagaaggcttatgctggggagaaa
gctgatgacattaacaggagtgaacatgctgtgacttctgcctgggaaggcttgctcgag
gctggtcagacccgcaggctcctcctgctggacaccgtggagaagttccgcttcttcaac
atggtgcgagacctcatgctctggatggacggtgtcaacctgcagattgatgcacatgac
agccccagggatgtatcttctgcagggttggtcattgccaatcatcaggacatcaagtca
gagattgagaccagggcagacagctttactgcctgttttgagatgggaaacactctcatt
aacaataatcactatgcagctgatgagattcgtgagaaactggctcaactccaggaaaag
agagacaagatcaacaaaaagtggcaagacaagatggaccatttacaaattgtgctggag
gtgttgcagtttggacgcgatgcctatgttgcagagtcttggttggcagggcaagaacct
ctggtgcgagcagcagagctgggtgcaaatgtggatgaggtagagagcctaattaagcgc
catgaggcctttgagaaacttgctgcagcctgggaagaccgctttgttctgctggagaaa
ctcactacacttgaggagcaggagatccagaggaggcgagaggaagaggagagagcacgg
cgaccccctacaccgccccctgtagaagttgtacagtctgagacagaaagtcatgcacat
gattctgcagccagaaccagtctggaccagaccacgctcaatcagtcggtgtcagtgaat
ggagtacacagcgacaatgacacatcgcagcagtcagtatcgctatcgttgtcagtggga
aagaaatcagatcctaaacgtgtgtgtaagccaaagcagccggagcgtggctcagagtct
gagtcggtgaacggtccaggtagggacagtgggctggcatcctctcgccttgatccttct
gccacgttaccaagcaggggtggagcagagtccgagccagaaaccatggaggggatgctc
tgtcgaaaacaggagatggagtcccacagcaaaaaggcagctaccaggtcatggcagaat
gtgtactgtgtcctaagaaaaggaagtcttggtttctataaagacggcaagagcgctagc
aatggcattccataccacggagaagtacccatcagcctcggagaggctgtgtgtgaggta
gccaatgactataagaagaggaaacatgtattcaagctcaggctaggagatggaaaagag
ttcctgttccaagcaaaggatgaggtggaaatgagctcctggatccattccatcctcagc
tctattccaaccggatcaggagactcgccaggaggtccacgggccctcagccgtgccatg
acgatgcctcccatctcccccagctcaggggatgccggaggtgttaccatgcgcaataaa
gatgggaaagacaaggatcgtgagaagaggttcagcttctttggcaagaaaaaatag
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integrated database retrieval system
