Salicibibacter cibarius: HUG15_00455
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Entry
HUG15_00455 CDS
T07370
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scia
Salicibibacter cibarius
Pathway
scia03030
DNA replication
scia03430
Mismatch repair
scia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUG15_00455 (dnaX)
03430 Mismatch repair
HUG15_00455 (dnaX)
03440 Homologous recombination
HUG15_00455 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scia03032
]
HUG15_00455 (dnaX)
03400 DNA repair and recombination proteins [BR:
scia03400
]
HUG15_00455 (dnaX)
Enzymes [BR:
scia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUG15_00455 (dnaX)
DNA replication proteins [BR:
scia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUG15_00455 (dnaX)
DNA repair and recombination proteins [BR:
scia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUG15_00455 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_assoc_2
AAA_22
TIP49
AAA_5
AAA_19
DnaX_C
Rad17
AAA_2
Toxin_YhaV
AAA_16
DUF815
DnaA_N
Cir_Bir_Yir
AAA_14
PIF1
Mg_chelatase
DUF7219
Adeno_E4
VapE-like_dom
AAA_28
DUF6886
Glyco_tranf_2_5
Cdc6_lid
Motif
Other DBs
NCBI-ProteinID:
QQK74239
UniProt:
A0A7T7CA15
LinkDB
All DBs
Position
95289..97031
Genome browser
AA seq
580 aa
AA seq
DB search
MSYQALYRVWRPQRLEDVAGQNHITQTLQNALRQQKFAHAYLFSGPRGTGKTSAAKIVAK
AVNCVHAPVAEPCNECDACLGIQTGSVVDVIEIDAASNNGVDEIRYIRDNVIAAPRDVRY
KVYIIDEVHMLSTGAFNALLKTLEEPPAHVVFILATTEAHKIPLTIVSRCQRFDFKRISG
ETLVARMKEVIAEGEIEVEDDALHFISRAAEGGMRDALSLLDQAISFADTKVTASDIQAI
TGAVSQSFLASAITSLIDGDARKAVQSADTLIREGKDPLRFMEDVIHYLRDLLLFQTAPD
VEELLDRVQVDDAFRSLADKIEPDWAYQTIDVLHDELREMKGSSHPKIFLEMAFIHICQG
DAGPQENASAGNQQVQQLMEQVQNLEAKIRTLEEGQAAQASPREEDAPRQAAPREKPRPS
PSSSNGAGVRQAQQLLEQASKDERVKVESRWAETLQTLKKESVPAHAWLNDAQPVAATTD
AVLLVFRNEMHRGMIADKFKALTEHAIAANNDHSYHILTLLKQDWDQLKEAYRGKSQQAA
TKETPTEANEEDPLITEAKKLVGSELVEVVDDSNIEEEDK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
ttgagttatcaagcgctttatcgtgtctggcgcccgcagcgtctggaggatgttgccggt
caaaatcacattacgcaaacactgcaaaatgcgcttcgccagcaaaaattcgcccatgcc
tatttattcagcggtccgcggggcacggggaagacgagcgctgccaagattgtcgcgaag
gccgtgaactgtgtgcatgccccggtagccgagccgtgcaatgaatgtgacgcatgcctc
gggatacagacaggatctgtcgtcgatgtgattgaaattgatgcagcttccaacaatggg
gtcgacgaaattcgttacatacgcgataacgtcattgccgcaccgcgcgatgtacgttat
aaagtgtacatcatcgatgaagtgcatatgctttcgaccggtgcctttaacgctttgtta
aaaacattggaagagcctcccgcccatgttgtttttattttggctacgacagaagctcac
aaaattccgcttacaatcgtttcccgttgccaacgctttgattttaagcgaatcagcggg
gagacccttgtggcacgaatgaaagaggttatcgccgagggagagatcgaggtagaggat
gatgcccttcattttatctcccgcgcggccgaaggtgggatgcgggatgcattgagcctg
cttgatcaggcgatttcctttgcagacacgaaagtcaccgcttctgacatccaagcgata
acgggggctgtttcccaatcgttcctcgcttccgcaataacgtcattgatcgatggggat
gcacgaaaagccgtgcaatcagcagatacgttgatacgggaaggtaaagatccgttgcgt
tttatggaggacgtcatccattatctacgtgatttattgctttttcagacggctcccgat
gtggaggagctcttggaccgtgtacaggttgatgatgcgtttcgttcccttgcggataaa
atagaaccggattgggcctatcaaacgattgatgtgcttcatgatgaattgcgggaaatg
aaagggtcgtcgcacccgaaaatttttctggaaatggcttttattcacatttgccaggga
gatgccgggccgcaggaaaatgcttcggcaggcaatcaacaggtgcaacagttaatggaa
caagtccaaaaccttgaagcaaaaatccgcaccttggaagaagggcaagcggcacaagct
tcgccccgggaagaagatgctccccgtcaagccgccccgcgagaaaaaccgagaccttca
ccaagctcttcaaacggtgcaggggtgagacaagcccaacagttgcttgagcaagcttcg
aaggatgagcgggtgaaagttgaatcacggtgggcggaaacattgcaaacgctgaaaaaa
gaaagtgtacccgcgcatgcgtggttgaatgacgcgcagccggtagcggcgacgacggac
gcggtgctcctcgtttttcgcaacgaaatgcaccgcggcatgattgccgataaatttaaa
gcattgacagagcacgccattgcggctaataatgaccatagttatcatatcttgacgttg
ctcaagcaagactgggaccaactaaaggaagcttatcgaggaaaatctcagcaagcggca
acgaaggagacgccgacggaagcaaacgaagaggatcccttgatcaccgaggcgaagaaa
cttgtcggctctgagttggtggaagtcgtggacgattcgaatatcgaggaggaagacaaa
tga
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