Salicibibacter cibarius: HUG15_03990
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Entry
HUG15_03990 CDS
T07370
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scia
Salicibibacter cibarius
Pathway
scia03420
Nucleotide excision repair
scia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUG15_03990
03430 Mismatch repair
HUG15_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scia03400
]
HUG15_03990
Enzymes [BR:
scia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUG15_03990
DNA repair and recombination proteins [BR:
scia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUG15_03990
MMR (mismatch excision repair)
Other MMR factors
HUG15_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
PhoH
AAA_30
SLFN-g3_helicase
DEAD
AAA_16
ResIII
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QQK74847
UniProt:
A0A7T6Z1B8
LinkDB
All DBs
Position
778034..780316
Genome browser
AA seq
760 aa
AA seq
DB search
MSQEHIDWETENERLQAVISRVKKKKEALKGESDELKDDVIELRRTFWDDVTVNLDEPDD
VIETQASLKQRAELLSERERSHGLLHQQKKTLNKLEDNPYFGRIDFTEDGENETEPIYIG
IASLMDKNDEEFLVYDWRAPISGMYYDFAPGRAHYPTLDGDVEGDITLKRQYIVRGGRLE
GMFDTGLTIGDELLQSLLGQQSSPQMKSIVASIQREQNQVIRNERSKMLIVRGAAGSGKT
SAALQRVAYLLYKHREKLDAGNMLLFSPNPLFTRYVSNVLPELGEDNLQQSTLFQHFEKR
LPSGWELESPHAHIEYFLSEQVEATRSQGLSVKTGPRFIDQLHDYVASLSRSGLIFKDLY
FRGEVWVTKTQLQDYFYQMDSSLSMSDRLEMVAEWLLKMLQITEREERPKAWVDEKMDLL
DQATYNRVFEKVEEDEEAFNDAVLAEDLLRKLVVRRTIKPLRKQIQAFDVLDVEAMYIQF
FRWARHKVIAEEVAYHFHKKEMHWEDAAPFFHFEDQLKGRPVYADIRHIFIDEAQDYTTM
QIRYLQHLFPSSRMTLLGDANQAVHAHTSAGNAPLVEDPAAKEQETITLHRSYRSTQPIV
EFTKQMVPNSEQIEAFERPGPKPEMKQLENEAQHDRYVGELAKRLEKSELGMVAIVTKTF
AESEEIWEQLTRAGRDVQLIHEQTSEFKAALLVLPVYLAKGIEFDAVVVTDASRANYYRE
RDRYLLYTACTRAMHELYLCANGEFSPFITDNVYEHYMQG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaggaacatatcgattgggaaacagagaacgagcggttgcaagccgtcatttcc
cgtgtgaaaaagaaaaaagaagcgcttaaaggggaaagcgatgaactcaaagatgatgtc
atcgagcttcggcgtacgttttgggatgatgtgactgtcaaccttgatgagccggatgat
gtcattgaaacgcaggccagcctgaagcaacgcgccgagttgttgagtgaacgtgagcgc
agtcacgggctacttcatcaacaaaaaaagacattgaataaattagaagacaatccgtat
tttgggcgcatcgatttcacggaagacggggagaacgaaacggaaccgatttatatcggc
atcgcttcgttaatggataaaaacgatgaagagtttctcgtgtacgattggcgcgcgccc
atctccggtatgtattacgactttgcgcccgggcgtgcccattacccgacgttagacggc
gatgtagagggtgacattacgctgaagcggcaatacattgtaaggggcggacgccttgaa
ggaatgtttgatacagggcttacgatcggcgatgaacttttacagtcattgctcggccag
caatcgtccccgcaaatgaaaagcatcgtcgcctcgatccaacgggaacaaaaccaggtc
atccgcaatgaacgcagcaaaatgctcatcgtgcgtggggctgcgggtagcgggaaaaca
tcagcggcgttgcagcgcgtggcttatcttctttataagcaccgggaaaagttggatgcc
gggaacatgttgttattttcgccaaatccgctgtttacgcgctatgtatccaacgtcctc
ccggaattgggagaagataacttgcagcagtccacgctcttccaacattttgaaaaacgg
ttgccgagtggctgggaattggaaagtccccacgcccatattgaatattttttatccgaa
caggttgaagcgacgcgctcacaaggcttgtcggtgaaaacgggccctcgtttcattgat
cagcttcacgattacgtagcttcgctctcccgctctggtcttatttttaaagatctttat
tttcgcggggaggtgtgggtgacaaagacgcaacttcaggactatttttatcaaatggat
tcgtccttgtcgatgtctgaccgtctggaaatggtggccgaatggttgctcaaaatgttg
cagattaccgaaagggaagaaaggccgaaagcatgggtcgatgagaaaatggatttgttg
gatcaagcgacgtacaaccgggtgtttgagaaggtagaggaggacgaggaagcattcaac
gatgccgtattggcagaggatttgctgcgaaaactcgtcgtccgtcgcacgataaagccg
ctgagaaaacaaattcaagcgttcgacgttctggacgtggaagcgatgtatatccagttt
ttccgatgggcaaggcataaagtgattgccgaggaggtggcgtatcatttccataaaaaa
gagatgcattgggaggatgcggcgccttttttccattttgaagatcagttaaaaggaagg
cctgtctacgcggacatccgccatattttcatcgatgaagcccaggattacacgacgatg
caaatccgttatttgcaacatttgtttccatcaagccgcatgacgttgctcggcgatgcc
aatcaagcggtgcacgcccatacgagtgcgggaaatgcgccgctcgtggaagatccggct
gcaaaagaacaagaaacaatcacgttgcaccggagttatcgctcgacgcaaccgatcgtt
gaatttacgaagcagatggttccgaatagcgagcagatagaagcttttgagcgtccggga
ccaaagccggagatgaagcaactggaaaatgaagcccagcatgatcgctatgtgggcgag
ttggctaaacgcctggaaaaaagcgaattgggcatggtcgcgatcgtgacgaagacgttc
gcggaaagtgaagagatttgggagcagctgacgagggcaggacgggacgtgcaactgatc
catgagcagacgtccgaatttaaagcggctttgctcgtattaccggtctatctcgcgaaa
ggaattgaattcgacgcggtggtcgtcaccgatgcctctcgggcgaactattaccgtgaa
cgggaccgttacttactttatacagcctgcacgcgcgcgatgcatgaattgtatctgtgt
gcgaatggtgagttttctccttttattacggataacgtttacgagcattatatgcaggga
tag
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