Salicibibacter cibarius: HUG15_06080
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Entry
HUG15_06080 CDS
T07370
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
scia
Salicibibacter cibarius
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scia03021
]
HUG15_06080 (sigB)
Transcription machinery [BR:
scia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUG15_06080 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
GerE
Sigma70_r4_2
Sigma70_ECF
DUF6761
HTH_23
DUF1492
NirdL-like_HTH
UPF0122
Orthoreo_P17
Motif
Other DBs
NCBI-ProteinID:
QQK75218
UniProt:
A0A7T6Z1R8
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All DBs
Position
1155472..1156269
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AA seq
265 aa
AA seq
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MGPTESKQKQSTNIDEANIYKWIESFQQEPTEEIQTALIRHYDPLVQSLARKFSRSQGHD
DDLYQVGMIGLLAALRRFDPAYKRSFESFAVPTIVGEIKRFIRDKTWSVHVPRRIKELGP
RIKNAVEELTTEYQRSPQVTEIAAHLEVTEEEVLETMEMGKSYQALSVDRSIEADTEGSE
VTLLDLVGSTEEGFEKTDQRLLLEKAFAVLTDREQEILHCTYFDNLSQKETGDRLDISQM
HVSRLQRRALHKLRDSIRVEPSECL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaacggaatcgaaacagaaacaatcaacaaacatcgatgaagcgaacatttac
aaatggattgaaagctttcaacaagaaccgacagaggagattcaaacagcgctaatccgt
cactacgacccgctcgttcaatcgcttgcgcgcaaattctcacggagccaagggcacgat
gacgacctttatcaagtcggtatgatcggtttacttgctgcgcttcgccgtttcgaccct
gcctataagcgctcattcgagtcattcgccgtccccacgattgtcggtgaaatcaagcgg
tttatcagggataaaacgtggagtgtccacgtgccccgacgaataaaagagttagggcca
aggatcaaaaatgctgtggaagagttaacgactgaataccaacgctcgccacaagtgact
gaaatcgccgctcatttggaagttacggaagaagaagtgctggaaacgatggaaatggga
aaaagctatcaagcgctttccgtggaccgttcgattgaagcggataccgaaggcagtgaa
gtaacgttgttggaccttgttggctcaacggaggaaggctttgaaaagaccgatcaacgc
cttctgttggaaaaggcgtttgccgtgctcaccgatcgtgaacaagaaattttgcattgt
acctattttgacaaccttagtcaaaaagagacaggcgaccgtttggacatctcgcaaatg
catgtctcccgtctgcaacggcgggcactgcataaattgcgtgattcaatccgcgttgaa
ccatcggagtgtctgtga
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